Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  591 bits (1524), Expect = e-173
 Identities = 303/604 (50%), Positives = 436/604 (72%), Gaps = 9/604 (1%)

Query: 6   KNLILWLVIAVVLMSVFQSF--GPGENNGRAVDYTTFVKEVGQGQIQEAQFN-NGEITFM 62
           KN  L+ ++A+V++++  +     G        Y+ FV+ V   Q+ +   + +     +
Sbjct: 6   KNAGLYALLAIVVIALGTALLDQRGTETVATWRYSEFVQRVENKQVAKVILSPDRSSALV 65

Query: 63  RRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQSL-LGTIFISWFPMILLIGVWI 121
           +   G +    +P  D +LL  L + +V +   P  + S+ L  +   +FP++LL+G++ 
Sbjct: 66  QAEDGDKVQVNLP-NDPQLLKILTDNNVDISVRPQNQDSVWLRALSSLFFPILLLVGLF- 123

Query: 122 FFMRQMQGGGGKGAMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRF 181
           F +R+ QGG G  AM+FGKSKAR+  E Q + TF+DVAG D+AK ++ E+VD+L++  RF
Sbjct: 124 FILRRAQGGPGNQAMNFGKSKARVQMEPQTQVTFNDVAGIDQAKLELTEVVDFLKNADRF 183

Query: 182 QKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF 241
             +G +IP GVL+VGPPGTGKTLLAKA+AGEA VPFF+ISGS+FVEMFVGVGASRVRD+F
Sbjct: 184 TAVGAQIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 243

Query: 242 EQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 301
           EQAK ++PCI+FIDEIDAVGRQRGAG+GGG+DEREQTLNQ+L EMDGFEGN GII++AAT
Sbjct: 244 EQAKASAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIIVAAT 303

Query: 302 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFS 361
           NRPDVLD AL+RPGRFDRQVVV  PD  GR +IL+VH R   L+ D++   IAR TPGF+
Sbjct: 304 NRPDVLDAALMRPGRFDRQVVVDRPDYNGRLEILRVHARGKSLSKDIDLDKIARRTPGFT 363

Query: 362 GADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAG 421
           GADL+NL+NEAA+ AAR +   +SM E   A D+++ G E++  VMSE+ K   AYHEAG
Sbjct: 364 GADLSNLLNEAAILAARRSLAEISMDEVNDAIDRVLAGPEKKDRVMSEKRKVLVAYHEAG 423

Query: 422 HAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVS---MSKQHLESMISSLYGGRL 478
           HA+VG L+P++DPV K+SIIPRGRA G+T + P ++R+     S+ +L++ ++   GGRL
Sbjct: 424 HALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEERMESGLYSRTYLQNQMAVALGGRL 483

Query: 479 AEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQT 538
           AEE+++G+E+V+TGASND+++   +AR+MVT++G S++LGP+     +G +FLGR +   
Sbjct: 484 AEEIVFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQQGNMFLGRDIAAE 543

Query: 539 KHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMA 598
           +  S++TA  IDDEVRQ++D  Y+RA++++++N  I+  +   L++ ET+DA ++ DL+ 
Sbjct: 544 RDFSEETAATIDDEVRQLVDVAYDRAKKVLIENRSILDQLAKMLVEKETVDAEELQDLLN 603

Query: 599 RKPV 602
              V
Sbjct: 604 NNEV 607