Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Peptidase M41, FtsH (NCBI) from Rhodospirillum rubrum S1H

 Score =  718 bits (1853), Expect = 0.0
 Identities = 370/637 (58%), Positives = 483/637 (75%), Gaps = 16/637 (2%)

Query: 3   DMAKNLILWLVIAVVLMSVFQSFGPGENNG--RAVDYTTFVKEVGQGQIQEAQFNNGEIT 60
           ++++NL+LW++IAV+L+ +F  F      G    V Y+ F+  V   ++++       I+
Sbjct: 2   NLSRNLLLWIIIAVLLVVLFNLFQTSAPRGPQTTVPYSDFLSSVDAREVRDVVIKGDSIS 61

Query: 61  FMRRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQ-SLLGTIFISWFPMILLIGV 119
                G + + TY P  D  ++  L +  V++   P E+      +I ISWFP +LLIGV
Sbjct: 62  GHTTDGRA-FTTYAP-RDADMVSHLRDSGVQISAVPAEDNVPTFWSILISWFPFLLLIGV 119

Query: 120 WIFFMRQMQGGGGKGAMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPS 179
           WIFFMRQMQ GGGK AM FGKS+A++++E   + TF DVAG DEAK++++E+V++LRDP 
Sbjct: 120 WIFFMRQMQSGGGK-AMGFGKSRAKLLTEKTGRVTFDDVAGIDEAKQELEEVVEFLRDPQ 178

Query: 180 RFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRD 239
           +FQ+LGGKIP GVL+VGPPGTGKTLLA+AIAGEA VPFFTISGSDFVEMFVGVGASRVRD
Sbjct: 179 KFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFTISGSDFVEMFVGVGASRVRD 238

Query: 240 MFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIA 299
           MFEQ KK +PC+IFIDEIDAVGR RGAG+GGG+DEREQTLNQ+LVEMDGFE NEG+I+IA
Sbjct: 239 MFEQGKKNAPCLIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGVILIA 298

Query: 300 ATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPG 359
           ATNRPDVLDPALLRPGRFDRQV V  PD+ GRE+ILKVHMRK PL  DV+  +IARGTPG
Sbjct: 299 ATNRPDVLDPALLRPGRFDRQVTVSNPDIMGREKILKVHMRKTPLGPDVDAKVIARGTPG 358

Query: 360 FSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHE 419
           FSGADL+NLVNEAAL AAR  KR V+M EFE AKDK++MGAERRSMVM+E+ KE TAYHE
Sbjct: 359 FSGADLSNLVNEAALLAARKGKRVVTMAEFEEAKDKVLMGAERRSMVMTEDEKEKTAYHE 418

Query: 420 AGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLA 479
           AGHA++      HDP++KV+IIPRGRALGVTM LPE+DR   S + L++ I+  +GGR+A
Sbjct: 419 AGHALIAIHQEGHDPLHKVTIIPRGRALGVTMSLPERDRYGYSLKELKARIAMAFGGRVA 478

Query: 480 EELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTK 539
           EE+IYG E V+TGASNDI +AT++AR+MVT++GFSEKLGP+ Y +++ EVFLG SVTQ K
Sbjct: 479 EEMIYGTENVTTGASNDIMQATDLARRMVTEFGFSEKLGPLRYTDNQEEVFLGHSVTQHK 538

Query: 540 HMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMAR 599
           ++SD+TA++ID+EVR+ +++   RAR+I+    D +  +   L++YET+   +++ L+  
Sbjct: 539 NLSDETARMIDEEVRRFVEQGEARAREILGKYKDELEIITRGLLEYETLSGDEVNKLLRG 598

Query: 600 KPVIR--EPAGWGEQS--------KTPSAPEVKAEPE 626
           + + R  +PA   ++S          P+A  V  +PE
Sbjct: 599 EDLNRAEQPAPPRDRSGRRASVPTSGPAAGGVGGDPE 635