Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 652 a.a., AAA family ATPase from Rhodopseudomonas palustris CGA009

 Score =  180 bits (456), Expect = 2e-49
 Identities = 95/241 (39%), Positives = 147/241 (60%), Gaps = 2/241 (0%)

Query: 141 SKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPG 199
           +  R ++ +   + + +V G D+ K  ++E V++ L+ P R        P G+L+ GP G
Sbjct: 372 ASTRSLTTEVAASHWDEVGGLDDIKALLRETVEWPLKYPQRLAFAKTTAPRGILLTGPTG 431

Query: 200 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDA 259
           TGKTL+ +A+A ++ V F  ++G + +  +VG     +RD+F +A++++P IIF DE+DA
Sbjct: 432 TGKTLIVRALATQSDVNFIAVNGPELLSKWVGETERAIRDVFRKARQSAPSIIFFDEVDA 491

Query: 260 VGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 319
           +   RG G  GG    ++ + Q L+EMDG  G +G++VIAATNRPD++D ALLRPGRFD 
Sbjct: 492 IVASRG-GDDGGARIGDRMVGQFLLEMDGLAGLDGVVVIAATNRPDLIDRALLRPGRFDH 550

Query: 320 QVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARG 379
              + LPD   R  IL +H R   L +DV+ + +A+   G SGADL  L   AA+ A R 
Sbjct: 551 IATLALPDRAARAAILAIHCRGRALGSDVDLAALAKACAGMSGADLEALCRRAAMAAIRA 610

Query: 380 N 380
           +
Sbjct: 611 S 611



 Score =  177 bits (450), Expect = 1e-48
 Identities = 99/231 (42%), Positives = 139/231 (60%), Gaps = 4/231 (1%)

Query: 149 DQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAK 207
           D   + + DV G       V+E+V+  LR P  F +LG + P GVL+ GPPG GKTL+A+
Sbjct: 107 DATTSPYDDVGGLAREVALVREMVELPLRFPHVFARLGIEAPKGVLLYGPPGCGKTLIAR 166

Query: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAG 267
            +A EA V F  ++G + ++   G     +R +F  A+K    IIF DEIDA+   R   
Sbjct: 167 TVAREAGVYFLHVNGPEIIQKHYGESEEMLRRIFADAQKQPAAIIFFDEIDAIAPNRETV 226

Query: 268 VGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 327
           +G   D  ++ + Q+L  MDG      I+VIAATN P+ LDPAL RPGRFDR++ +  PD
Sbjct: 227 LG---DVEKRVVAQLLALMDGLTARGNIVVIAATNLPNSLDPALRRPGRFDREIGIAPPD 283

Query: 328 VRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
             GR +IL++H R++PLA+DV+ + IA    G+ GADLA L  EAA+   R
Sbjct: 284 RAGRLEILRIHTRRMPLADDVDLAQIAAAAHGYLGADLAALCREAAMGCTR 334