Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis JJ

 Score =  224 bits (571), Expect = 6e-63
 Identities = 122/266 (45%), Positives = 169/266 (63%), Gaps = 2/266 (0%)

Query: 145 MMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKT 203
           M  E++   +F D+ G +    D+KE+V+  L++P  F+K+G   P GVL+ GPPGTGKT
Sbjct: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196

Query: 204 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQ 263
           LLAKA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ SPCIIFIDEIDAV  +
Sbjct: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256

Query: 264 RGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 323
           R   + GG  E ++TL Q+L EMDGF+    + +IAATNRPD+LDPA+LRPGRFDR + +
Sbjct: 257 RTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEI 316

Query: 324 GLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRN 383
            +PD  GR +ILK+H  K+ L   V+   +A+      GADL  +  EA +FA R  +  
Sbjct: 317 SMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREF 375

Query: 384 VSMVEFELAKDKIMMGAERRSMVMSE 409
           + M +F  A  KI    E+ S  M +
Sbjct: 376 IKMDDFREAISKITGKKEKCSYDMPQ 401