Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., AAA family ATPase from Methanococcus maripaludis JJ

 Score =  142 bits (358), Expect = 3e-38
 Identities = 78/226 (34%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 152 KTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
           +TTF +V G  +AK+  K ++ YL +P  F   G   P  +L  GPPGTGKT+LA+A+A 
Sbjct: 122 ETTFEEVVGQLDAKKKCKIVIKYLENPELF---GEWAPKNILFYGPPGTGKTMLARALAT 178

Query: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG 271
           E  VP + I  ++ +   VG G+ ++  ++E A + +P IIFIDE+DA+   R      G
Sbjct: 179 ETDVPLYLIKATELIGDHVGDGSKQIESLYENASENTPSIIFIDELDAIALSRQFQSLRG 238

Query: 272 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR 331
             +  + +N +L E+DG + N G++ IAATN P++LD A+    RF+ ++   +PD   R
Sbjct: 239 --DVSEVVNALLTELDGIKNNLGVVTIAATNNPEMLDNAI--RSRFEEEIEFKMPDDNER 294

Query: 332 EQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAA 377
            +I+++++ K+P+A + +       T G +G  +     + AL  A
Sbjct: 295 LKIIELYVEKMPIAVNADLKKYVEKTKGMNGRTIKEKFLKPALHKA 340