Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., cell division protein FtsH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  936 bits (2419), Expect = 0.0
 Identities = 477/650 (73%), Positives = 547/650 (84%), Gaps = 8/650 (1%)

Query: 4   MAKNLILWLVIAVVLMSVFQSFGPGENNGRAVDYTTFVKEVGQGQIQEAQFNNGEITFM- 62
           MAKNLILW+VIAVVLMSVFQ + P  ++ + +DY+TF+  V  GQ+   +  + + T   
Sbjct: 1   MAKNLILWVVIAVVLMSVFQGYSPSSSSSQKMDYSTFLDNVRDGQVATVEVKSDQRTIEG 60

Query: 63  RRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQSLLGTIFISWFPMILLIGVWIF 122
            +  G ++ T MP+YDQ L++DL  + + ++G   EE   L  IFISWFPM+LLIGVWIF
Sbjct: 61  SKRTGEKFTTIMPLYDQDLINDLDRKGITMKGQEAEESGFLTQIFISWFPMLLLIGVWIF 120

Query: 123 FMRQMQGGGGKGAMSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQ 182
           FMRQMQGGGGKGAMSFGKSKA++MSEDQIKTTF+DVAGCDEAKE+VKELVDYLRDP++FQ
Sbjct: 121 FMRQMQGGGGKGAMSFGKSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQ 180

Query: 183 KLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 242
           KLGG+IPTGVLMVGPPGTGKTLLAKAIAGE+KVPFFTISGSDFVEMFVGVGASRVRDMFE
Sbjct: 181 KLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFE 240

Query: 243 QAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 302
           QAKK++PCIIFIDEIDAVGRQRGAG+GGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN
Sbjct: 241 QAKKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 300

Query: 303 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSG 362
           RPDVLD ALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPL+ DV+ S+IARGTPGFSG
Sbjct: 301 RPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSG 360

Query: 363 ADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGH 422
           ADLANLVNEAALFAARGN+R V M EFE AKDKIMMGAERRSMVMSE  KE TAYHEAGH
Sbjct: 361 ADLANLVNEAALFAARGNRRVVGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGH 420

Query: 423 AVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEEL 482
           A+VG LVPEHDPV+KV+IIPRGRALGVT +LPE D +S S++ LES IS  YGGRLAEEL
Sbjct: 421 AIVGCLVPEHDPVHKVTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEEL 480

Query: 483 IYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMS 542
           IYG EKVSTGAS DI+ AT IAR MVTQWGFS+KLGP+LYAE+EGEVFLGRS+ + K MS
Sbjct: 481 IYGTEKVSTGASQDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMS 540

Query: 543 DDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKPV 602
           D+TA LID EV+  ID+NY RA+QI+ DN+DI+H+MKDALMKYETID+ QIDDLM R+ V
Sbjct: 541 DETATLIDTEVKAFIDKNYSRAKQILQDNVDILHSMKDALMKYETIDSLQIDDLMNRREV 600

Query: 603 IREPAGW-GEQSKTPSAPEVKAEPEAKAEESTAETASSDVATASEKKDAE 651
            R+PA W  +++ +      K EP  K +E      +      +E KDA+
Sbjct: 601 -RQPADWQADENGSNDKGNGKGEPAVKVDEVVKSAPAE-----AELKDAD 644