Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., AAA-metalloprotease FtsH, with ATPase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  509 bits (1312), Expect = e-148
 Identities = 289/664 (43%), Positives = 422/664 (63%), Gaps = 45/664 (6%)

Query: 10  LWLVIAVVLMSVFQSFGPGENNGRAVDYTTFVKEVGQGQIQ---------EAQFNNGEIT 60
           L+++IA++L+ ++ S     +  + V Y+ F K V  G I          EA      + 
Sbjct: 9   LYMIIALMLLGLWWSSDSRGSGSKVVPYSDFQKYVTNGYISKVLGSEKTLEAHVKPNAVG 68

Query: 61  FM-----RRGGGSRYVTYMPVYDQKLLDDLINQDVKVQG------TPPEEQSLLGTIFIS 109
            +      + G +  +T  P    +L  D   QD K  G        P +  +   I I+
Sbjct: 69  AIFGADSTKVGRNPIITSNPPSKDRL--DKFLQDEKAAGHFDGIADYPADSDIFPAILIN 126

Query: 110 WFPMILLIGVWIFFMRQMQGGGGKGA---MSFGKSKARMMSED-QIKTTFSDVAGCDEAK 165
             P++LLI +WIFFMR+M GGGG GA    + GKSKA++  +   IK TF DVAG  EAK
Sbjct: 127 ILPLVLLIALWIFFMRRMSGGGGGGAGGVFNVGKSKAQLFEKGGSIKITFKDVAGLAEAK 186

Query: 166 EDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF 225
           ++V+E+V++L++P ++  LGGKIP G L+VGPPGTGKTLLAKA+AGEA VPFF+++GSDF
Sbjct: 187 QEVEEIVEFLKEPQKYTDLGGKIPKGALLVGPPGTGKTLLAKAVAGEANVPFFSLAGSDF 246

Query: 226 VEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVG-GGHDEREQTLNQMLV 284
           VEMFVGVGASRVRD+F+QAK+ +PCI+FIDEIDAVGR RG     GG+DERE TLNQ+L 
Sbjct: 247 VEMFVGVGASRVRDLFKQAKEKAPCIVFIDEIDAVGRARGKNPAMGGNDERENTLNQLLT 306

Query: 285 EMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPL 344
           EMDGF  N G+I++AATNR DVLD ALLR GRFDRQ+ V LPD+  R+++  VH+R + +
Sbjct: 307 EMDGFGSNSGVIILAATNRVDVLDKALLRAGRFDRQIHVDLPDLNERKEVFGVHLRPIKI 366

Query: 345 ANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRS 404
            + V+  L+AR TPGFSGAD+AN+ NEAAL AAR  K+ V   +F  A D+I+ G E+++
Sbjct: 367 DDTVDVDLLARQTPGFSGADIANVCNEAALIAARHGKKFVGKQDFLDAVDRIIGGLEKKT 426

Query: 405 MVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQ 464
            + +E  + S A HEAGHA +  L+   +P+ KV+I+PRGRALG   YLPE+ +++  +Q
Sbjct: 427 KITTEAERRSIALHEAGHASISWLLEYANPLIKVTIVPRGRALGAAWYLPEERQITTKEQ 486

Query: 465 HLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAE 524
            L+ M ++L GGR AE+L  G  ++STGA ND+ER T+ A  M+   G S+KL  + Y  
Sbjct: 487 MLDEMCATL-GGRAAEDLFIG--RISTGAMNDLERVTKQAYGMIAYLGMSDKLPNLCYYN 543

Query: 525 DEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMK 584
           +E   F        +  S+ TA+LID+EV+++++  YERA++I+ ++M+  + +   L+ 
Sbjct: 544 NEEYSF-------NRPYSEKTAELIDEEVKRMVNEQYERAKKILSEHMEGHNELAQLLID 596

Query: 585 YETIDAGQIDDLMARKPVIREPAGWGEQSKTPSAPEVKAEPEAKAEESTAETASSDVATA 644
            E I A  ++ +  ++P       W  +S+   A + +++  A+AE   AE   ++    
Sbjct: 597 KEVIFAEDVERIFGKRP-------WASRSEEIMAAK-ESQDAARAERELAEKLKAEEQEI 648

Query: 645 SEKK 648
            E++
Sbjct: 649 KEEE 652