Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., 23S rRNA methylase from Pseudomonas stutzeri RCH2

 Score =  234 bits (598), Expect = 6e-67
 Identities = 113/205 (55%), Positives = 152/205 (74%)

Query: 5   KHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGG 64
           K S SS RWL EH +D +V  A+K G RSR+ +K+ E+  KDKL++ GM V+DLG+APGG
Sbjct: 2   KRSKSSRRWLDEHVNDPFVKRAQKDGLRSRSSYKLIELNEKDKLIRPGMLVMDLGSAPGG 61

Query: 65  WSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSD 124
           WSQ A  +VGE G+V+A D+LPM  +  V F+QGDF E+AV   +LD +     D+++SD
Sbjct: 62  WSQVAGGIVGEKGKVLATDILPMGGLDNVDFVQGDFTEDAVFQQILDMLDGRQPDLIVSD 121

Query: 125 MAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKV 184
           +APN++G  + DQ  +MYLVEL LDM RQVL P G++VVKVFQGEG D+++K VR  F+ 
Sbjct: 122 IAPNISGVAAADQAASMYLVELTLDMVRQVLKPGGNYVVKVFQGEGSDEFLKDVRSSFEK 181

Query: 185 VKIRKPDSSRSRSREVFIVATGYKG 209
           V IRKP++SR RSREV++VA G+KG
Sbjct: 182 VVIRKPEASRPRSREVYLVAKGFKG 206