Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., 23S rRNA methyltransferase J (RefSeq) from Shewanella amazonensis SB2B

 Score =  322 bits (826), Expect = 2e-93
 Identities = 156/208 (75%), Positives = 183/208 (87%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           M+ +K SASSTRW++EHFDD YV  A+K+G RSRA FK+EE+Q KD L+K GMTVVDLGA
Sbjct: 1   MTAKKRSASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDHLIKPGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ A K+VG+ G+VIACD+LPM+ I GV FLQGDFRE+AVLNALL+R+  + VDV
Sbjct: 61  APGGWSQVAVKLVGDRGKVIACDILPMDPIVGVDFLQGDFREDAVLNALLERVGDEKVDV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           V+SDMAPNM+G+  VDQPRAMYLVELALDMC QVLAPNGSF VKVFQGEGFD+Y+KAVR+
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVRE 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
            FKVVK RKPDSSR+RSREV++VATGYK
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208