Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Ribosomal RNA methyltransferase RrmJ/FtsJ (NCBI) from Rhodospirillum rubrum S1H

 Score =  160 bits (405), Expect = 2e-44
 Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 5/206 (2%)

Query: 8   ASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQ 67
           ASSTRWL+   +D YV EAK++G RSRA FK+ E+  +  LLK GM VVDLGAAPGGW+Q
Sbjct: 47  ASSTRWLQRQLNDPYVLEAKRQGLRSRAAFKLIELDERFTLLKPGMRVVDLGAAPGGWTQ 106

Query: 68  FAAK----VVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMS 123
            A +    +   GG+V+  D+L  E +AG + L  DF ++A    +L       VD+V+S
Sbjct: 107 IAVERTRSLHPNGGKVVGMDILEWEGVAGATCLTHDFMDDAA-PLMLKGAMDGAVDLVLS 165

Query: 124 DMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFK 183
           DMA    G+   D  R M L E A     +VLAP G+FV KVFQG      +  ++ + +
Sbjct: 166 DMAAPTTGHRQTDHLRVMGLAEAAWYFAEEVLAPGGAFVCKVFQGGTEGALLTRMKKMCE 225

Query: 184 VVKIRKPDSSRSRSREVFIVATGYKG 209
           V++  KP +SR  S EV+++A G++G
Sbjct: 226 VIRHAKPPASRQGSPEVYVIAQGFRG 251