Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Pseudomonas sp. BP01

 Score =  242 bits (618), Expect = 3e-69
 Identities = 114/205 (55%), Positives = 156/205 (76%)

Query: 5   KHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGG 64
           + S SS  WL+EHF+D +V +A+K GYRSRA +K+ EIQ KD+L++ GM+V+DLGAAPGG
Sbjct: 3   QRSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGG 62

Query: 65  WSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSD 124
           WSQ  ++++G  GR+IA D+L M+SI  V+F+QGDF ++AVL  +L  +    VD+V+SD
Sbjct: 63  WSQVTSRLIGGQGRLIASDILEMDSIPDVTFIQGDFTDDAVLQQILAAVGDSHVDLVISD 122

Query: 125 MAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKV 184
           MAPNM+G   VD PRAM+L ELALD+  +VL P G F++K+FQGEGFD Y+K VR  F  
Sbjct: 123 MAPNMSGTPEVDMPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDMYLKDVRTKFDK 182

Query: 185 VKIRKPDSSRSRSREVFIVATGYKG 209
           V++RKP SSR RSRE +++  G+KG
Sbjct: 183 VQMRKPSSSRDRSREQYLLGKGFKG 207