Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Pseudomonas aeruginosa PA14

 Score =  250 bits (639), Expect = 1e-71
 Identities = 120/203 (59%), Positives = 158/203 (77%)

Query: 7   SASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWS 66
           S +S RWLKEHFDD YV  A++ GYRSRA +K+ EIQ KD++L+ GMTVVDLGAAPGGWS
Sbjct: 4   SKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGWS 63

Query: 67  QFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSDMA 126
           Q  ++V+G+ GR+IA D+L M+SI  V+F+QGDF E+AV   +L+ I    VD+V+SDMA
Sbjct: 64  QVTSRVIGDRGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGDHPVDLVISDMA 123

Query: 127 PNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVK 186
           PNM+G  + DQPRAMYL ELALD+  +VL P G F++K+FQGEGFD Y K  R++F  V+
Sbjct: 124 PNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYHKQAREMFDKVQ 183

Query: 187 IRKPDSSRSRSREVFIVATGYKG 209
           +RKP SSR RSRE +++A G++G
Sbjct: 184 MRKPLSSRDRSREQYLLARGFRG 206