Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., 23S rRNA methyltransferase J (RefSeq) from Shewanella loihica PV-4

 Score =  316 bits (810), Expect = 2e-91
 Identities = 155/208 (74%), Positives = 177/208 (85%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           MS +K +ASSTRW++EHFDD YV  ++K+G RSRA FKIEEIQ KDKL++ GMTVVDLGA
Sbjct: 1   MSGKKRTASSTRWMQEHFDDHYVKLSQKRGLRSRAAFKIEEIQQKDKLIRPGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ A K+ GE G+VIACD+LPM+ I GV FLQGDFREE VLNALL+R+    VDV
Sbjct: 61  APGGWSQIAVKLAGETGKVIACDILPMDPIVGVDFLQGDFREEKVLNALLERVGDAKVDV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           V+SDMAPNM+G   VDQPRAMYLVELALDMC QVLAPNGSF VKVFQGEGFD+Y+KAVR+
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVRE 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
            F  VK RKPDSSR RSREV++VATGYK
Sbjct: 181 AFTTVKTRKPDSSRPRSREVYLVATGYK 208