Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  315 bits (806), Expect = 5e-91
 Identities = 153/208 (73%), Positives = 179/208 (86%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           MS +K +ASS RW+ EHFDD YV  A+K+G RSRA FK+EE+Q KD+L++ GMTVVDLGA
Sbjct: 1   MSGKKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ A K+VG+ G+VIACD+LPM+ I GV FLQGDFREE VL ALL R+  D VDV
Sbjct: 61  APGGWSQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           V+SDMAPNM+G+  VDQPRAMYLVELALDMC QVLAPNGSF VKVFQGEGFD+Y+KAV++
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
            FKVVK RKPDSSR+RSREV++VATGYK
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208