Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., 23S rRNA methyltransferase J (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (815), Expect = 5e-92
 Identities = 154/208 (74%), Positives = 180/208 (86%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           MS +K +ASSTRW++EHFDD YV  A+K+G RSRA FK+EE+Q KD+L++ GMTVVDLGA
Sbjct: 1   MSGKKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDQLIRPGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ A K+ G+ G+VIACD+LPM+ I GV FLQGDFREE VL ALL R+  D VDV
Sbjct: 61  APGGWSQIAVKLTGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           V+SDMAPNM+G+  VDQPRAMYLVELALDMC QVLAPNGSF VKVFQGEGFD+Y+KAV+D
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKD 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
            FKVVK RKPDSSR+RSREV++VATGYK
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208