Pairwise Alignments

Query, 157 a.a., transcription elongation factor GreA from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., transcription elongation factor GreB (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 2e-24
 Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 3/157 (1%)

Query: 1   MEKVPMTARGEKLLREELDRLLK-LRPKITEAIAEARELGDLKENAEYHAAREEQGICEA 59
           M+ + +T  G + L  EL  L K  RP+IT+ + EA   GD  ENA+Y   +      ++
Sbjct: 1   MKAMLITREGWQALDRELKYLWKEYRPEITKKVQEAAAQGDRSENADYTYNKRLLRQIDS 60

Query: 60  QIRDIEYKLSVAQVIDVTKMENSGKVIFGATVTVIDVNSDEEKTYQIVGDDEADIKSGRI 119
           ++R +  ++   Q++D +  +  GKV FGA V + D  + +   Y+IVG DE D K G I
Sbjct: 61  RVRYLVKRVEDLQIVDYSPQQE-GKVFFGAWVELED-ETGKIVRYRIVGKDELDTKLGYI 118

Query: 120 SVNSPIARGLIGKFEGDEVSIATPGGNKVFEIDRVEY 156
           +++SP+AR LIGK   DEV + TP G K + +++++Y
Sbjct: 119 TIDSPMARALIGKQVDDEVVVNTPAGKKEWYVNKIQY 155