Pairwise Alignments

Query, 157 a.a., transcription elongation factor GreA from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcription elongation factor GreB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.0 bits (219), Expect = 3e-23
 Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 6   MTARGEKLLREELDRLLK-LRPKITEAIAEARELGDLKENAEYHAAREEQGICEAQIRDI 64
           +T +G   L +EL  L K  RP+IT  + EA   GD  ENA+Y   +      ++++R +
Sbjct: 6   ITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYTYNKRLLRQIDSRVRYL 65

Query: 65  EYKLSVAQVIDVTKMENSGKVIFGATVTVIDVNSDEEKTYQIVGDDEADIKSGRISVNSP 124
             +L   +++D +  +  GK+ FGA    ++ ++ E   Y+IVG DE D K G I+++SP
Sbjct: 66  VKRLEELKIVDYSPQQE-GKIYFGAWFE-LENDAGERVRYRIVGKDELDTKLGYITIDSP 123

Query: 125 IARGLIGKFEGDEVSIATPGGNKVFEIDRVEY 156
           +AR LIGK   DEV + TP G K + I+ + Y
Sbjct: 124 MARALIGKQVDDEVVVQTPSGPKAWYINEIRY 155