Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., OmpK36 porin from Klebsiella michiganensis M5al

 Score =  100 bits (248), Expect = 8e-26
 Identities = 101/387 (26%), Positives = 160/387 (41%), Gaps = 61/387 (15%)

Query: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKA 69
           M   +++L V A  VA  A A           + VY+  G  L++ G+ +      D K 
Sbjct: 1   MKVKVLSLLVPALLVAGAANA-----------AEVYNKDGNKLDLYGKIDGLHYFSDDKG 49

Query: 70  QDNSR--VRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIG-GTY 126
           QD  +  +RL   G+ +IND L G G +E     N+    +S++    R  +AG+  G  
Sbjct: 50  QDGDQTYMRLGIKGETQINDQLTGYGQWEYNVQANNT--ESSSDQAWTRLAFAGLKFGDA 107

Query: 127 GEVTYGKNDGALGVITDFTDIM-SYHGNTAAEKIAVADRVDNMLAYKGQ--FGDL-GVKA 182
           G   YG+N G +  +T +TD++  + G+T      +  R + +  Y+    FG + G+  
Sbjct: 108 GSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFLQSRANGVATYRNSDFFGLVDGLNF 167

Query: 183 SYRFADRN-AVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQD--- 238
           + ++  +N +V   G   T         NG DGY  S  Y   D G + G  YA+     
Sbjct: 168 ALQYQGKNGSVSGEGTSPTNNGRGALKQNG-DGYGTSLTYDIYD-GISAGFAYANSKRNG 225

Query: 239 DQNE------------YMLAASYRMENLYFAGLFTDGELAKDVDYTGY-------ELAAG 279
           DQN             Y     Y   N+Y A  +T    A  V   G+       E+ A 
Sbjct: 226 DQNSQLALGQGDNAETYTGGLKYDANNIYLASQYTQTYNATRVGSLGFANKAQNFEVVAQ 285

Query: 280 YKLG----------QAAFTATYNNAETAKETSADNFA---IDATYYFKPNFRSYISYQFN 326
           Y+            Q+     Y N         D      + ATYYF  N  +Y+ Y+ N
Sbjct: 286 YQFDFGLRPSVAYLQSKGKDLYINGTNRSYGDQDILKYVDVGATYYFNKNMSTYVDYKIN 345

Query: 327 LLDSD---KVGKVASEDELAIGLRYDF 350
           LLD +   +   ++++D +A+GL Y F
Sbjct: 346 LLDENNFTRAAGISTDDIVALGLVYQF 372