Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Outer membrane porin C from Enterobacter sp. TBS_079

 Score = 93.6 bits (231), Expect = 7e-24
 Identities = 97/392 (24%), Positives = 167/392 (42%), Gaps = 72/392 (18%)

Query: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKA 69
           M   +++L V A  VA  A A           + +Y+  G  L++ G+ +      D K+
Sbjct: 1   MKVKVLSLLVPALLVAGAANA-----------AEIYNKDGNKLDLYGKVDGLHYFSDDKS 49

Query: 70  QDNSR--VRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIG-GTY 126
            D  +  +RL F G+ ++ND L G G +E +   N    + S+N    R  +AG+     
Sbjct: 50  NDGDQTYMRLGFKGETQVNDQLTGYGQWEYQIQGNT---SESDNQSWTRVAFAGLKFADA 106

Query: 127 GEVTYGKNDGALGVITDFTDIM-SYHGNTAAEKIAVADRVDNMLAYKGQ--FGDL-GVKA 182
           G   YG+N G +  +T +TD++  + G+T      +  R + +  Y+ Q  FG + G+  
Sbjct: 107 GSFDYGRNYGVIYDVTSWTDVLPEFGGDTYGADNFLQSRANGVATYRNQDFFGLVDGLNF 166

Query: 183 SYRFADRNAVDAMGNVVTETNAAKYS--DNGEDGYSLSAIYTFGDTGFNVGAGYADQD-- 238
           + ++  +N     G+V  E ++ + +   NG DGY  S  Y  G+ GF++G   +     
Sbjct: 167 ALQYQGKN-----GSVSGENDSGRSTLKQNG-DGYGASVTYNLGE-GFSIGGAMSSSKRT 219

Query: 239 -DQNE---------------YMLAASYRMENLYFAGLFTD-------GELAKDVDYTGY- 274
            DQN+               Y     Y   N+Y A  ++        G      D  G+ 
Sbjct: 220 ADQNDTANLALKGEGDRAEVYSGGLKYDANNIYLAAQYSQTYNATRFGNSQSSSDIYGFA 279

Query: 275 ------ELAAGYKL--GQAAFTATYNNAETAKETSADN-----FAIDATYYFKPNFRSYI 321
                 E+ A Y+   G     A   +     E   D        + ATYYF  N  +Y+
Sbjct: 280 NKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDIEGYGDQDLLKYVDVGATYYFNKNMSTYV 339

Query: 322 SYQFNLLDSDKVGK---VASEDELAIGLRYDF 350
            Y+ NL+D ++  +   + ++D +A+GL Y F
Sbjct: 340 DYKINLVDENEFTRQAGIGTDDIVALGLVYQF 371