Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Outer membrane porin N from Enterobacter sp. TBS_079

 Score =  102 bits (254), Expect = 2e-26
 Identities = 96/387 (24%), Positives = 161/387 (41%), Gaps = 64/387 (16%)

Query: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKA 69
           M + ++AL + A  +A  A+A           + +Y+  G  L++ G+ +      D  +
Sbjct: 1   MQRKVLALIIPALLMAGAAHA-----------AEIYNKDGNKLDLYGKVDGLHYFSDDAS 49

Query: 70  QDNSR--VRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIG-GTY 126
           +D  +  +RL F G+ +IN+ +   G+ + E+         S+N    R  +AGI  G Y
Sbjct: 50  KDGDQTYMRLGFKGETQINNMM--TGYAQWEYNIQANNTEGSDNQSWTRLAFAGIKVGDY 107

Query: 127 GEVTYGKNDGALGVITDFTDIMSYHGN---TAAEKIAVADRVDNMLAYKG-QFGDL--GV 180
           G   YG+N G L  +  +TD++   G    T A+   +  R + +  Y+   F  L  G+
Sbjct: 108 GSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTNADNF-MTGRANGVATYRNTDFYGLVQGL 166

Query: 181 KASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQ 240
             + ++  +N  DA  N     N         DG+ +S  Y FG  G + GA Y   D  
Sbjct: 167 NFALQYQGKNE-DASNNQEGTNNGRDTRHENGDGFGISTTYDFG-MGISAGAAYTSSDRT 224

Query: 241 NEYMLAAS--------------YRMENLYFAGLFTDGELAKDVDYTGYELAAGYKLGQAA 286
           NE ++  +              Y   N+Y A +++  E      Y     A   K     
Sbjct: 225 NEQVMNTTAGGDKADAWTAGLKYDANNIYLAAMYS--ETRNMTPYGDNTDAVANKTQNVE 282

Query: 287 FTATYN------NAETAKETSADNFA-------------IDATYYFKPNFRSYISYQFNL 327
            TA Y        A +  ++   + A             + ATYYF  N  +Y+ Y+ NL
Sbjct: 283 VTAQYQFDFGLRPAISYLQSKGKDLANGQGDQDLVKYADVGATYYFNKNMSTYVDYKINL 342

Query: 328 LDSD----KVGKVASEDELAIGLRYDF 350
           LD D    K   ++++D +A+GL Y F
Sbjct: 343 LDEDDSFYKNNGISTDDVVALGLVYQF 369