Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., Outer membrane protein (porin) from Paraburkholderia bryophila 376MFSha3.1

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 51/172 (29%), Positives = 73/172 (42%), Gaps = 25/172 (14%)

Query: 76  RLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIGGT-YGEVTYGKN 134
           R    G  ++   L  V   E  F   + G+ AS+ +L NR  Y G+    YG VT+G+ 
Sbjct: 62  RWGLKGNEDLGGGLSAVFRLENGFNLWN-GQLASSGTLFNRMAYVGLSSNKYGTVTFGRQ 120

Query: 135 D----GALGVITDFTDIMSY-HGNTAAEKIAVADRVDNMLAYKGQFGDLGVKASYRFADR 189
           +      LG + D   + +Y         +    R +N + Y GQFG L V+A Y F   
Sbjct: 121 NTPLFDQLGNVYDPLTVGNYDQDGWLPGALGYGLRQNNSVKYSGQFGGLNVEAMYGF--- 177

Query: 190 NAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQN 241
                 G V   T A        + Y L+A YT+G  G ++ AGY    D N
Sbjct: 178 ------GGVAGSTGA-------NNMYGLTASYTYG--GLSLDAGYQQNSDAN 214