Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Pseudomonas stutzeri RCH2

 Score = 67.8 bits (164), Expect = 8e-16
 Identities = 91/397 (22%), Positives = 163/397 (41%), Gaps = 42/397 (10%)

Query: 63  LNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLMRSGQ--------DWIIRFSGDPTL 114
           +N  +   PAST K++T  AA   LG   ++ T+    G         +  ++  GDP L
Sbjct: 64  INADVSVNPASTMKLVTTYAALELLGPNHQWKTEFYADGPLVDGTLNGNLYLKGGGDPKL 123

Query: 115 TTADLTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAP------AS 168
               L  LL+ ++A    ++ GDL LD S F   E  V   +D  G   + P      + 
Sbjct: 124 NMEKLWLLLRDLRANGVNKVTGDLVLDRSHFVQPELPV---FDDDGGDQNKPFLVGPDSL 180

Query: 169 AINLDANCIQASIYTEPQGKTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATPEN 228
            +NL A      I     GK  + V        +    SV    +   L   +    PE 
Sbjct: 181 LVNLKA---LRFIVRNDGGKVNIAV--------EPPIASVRIDNRVQALPAAKCPGWPEV 229

Query: 229 HYTL----DGCLALRDKPLPLKFAVQ------DTGIYTQRVVYRLLSQLNIELKGKIKVG 278
            Y      DG   +    L    + Q      D   Y    V  + ++L   + G+ +V 
Sbjct: 230 LYNPVADGDGVTVVVTGKLAAGCSAQTYLSLLDHERYAAGAVRAIWAELGGSILGRDRVA 289

Query: 279 KANTKQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSF-TNGTQAI 337
           +  +  A+ +A  +S  L  +++ + + S+N +A  L  +LG  F ++  +      Q +
Sbjct: 290 QVPSS-ARLLARAYSPDLTEIIRDINKYSNNTMAKQLFLSLGATFRNEADADDAKAAQRV 348

Query: 338 KQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGES 397
            + + ++ G+      + +GSGLSR  R+  +     L+  ++       I+ +P A   
Sbjct: 349 IRQWLAKKGLISPHLVIENGSGLSRAERVSAREFGNLLQAAWRSPYAAEFISSMPLAAVD 408

Query: 398 GTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFVMD 434
           GT+  R+ +R   ++G+   K+G+L     +AG+  D
Sbjct: 409 GTM--RKRLRNTPVAGKAHVKTGTLNNVRAIAGYSRD 443