Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  208 bits (529), Expect = 4e-58
 Identities = 143/400 (35%), Positives = 211/400 (52%), Gaps = 18/400 (4%)

Query: 42  PQGARYSLLIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLMRSG 101
           P+    ++L  D+  QQ  +  N+     PAS QK+L ALAA+  LG  FRFHT L   G
Sbjct: 114 PKQTNVAVLAVDLKTQQVIISDNSERAMLPASVQKLLLALAAQHTLGPDFRFHTQLFVQG 173

Query: 102 ------QDWIIRFSGDPTLTTADLTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWP 155
                 +   I FSGDP LT+A+L+ LL ++K Q G R    ++L ++V    ++A GW 
Sbjct: 174 FKPPVLERLYIGFSGDPLLTSAELSALLGSLK-QQGVRTINQVYLVSAVDKS-DKAPGWV 231

Query: 156 WDILGVCYSAPASAINLDANCIQASIY-TEPQGKTRVYVPEHYPVHVQSQAISVTQSEQE 214
           WD LGVCY++P +  +LD NC++AS+  TE    T V + +   + +++Q      +  +
Sbjct: 232 WDDLGVCYASPVAEFSLDKNCVKASLRPTEKGDGTYVRLAKDAAISIENQLNYRPGASFK 291

Query: 215 SLLCDLELTATPENHYTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQ--LNIELK 272
              C   L+    N Y L GC + + + LPL  AV DT  + Q  V  LL     N    
Sbjct: 292 E--CSPHLSVVGPNRYLLHGCYSGK-QALPLSIAVTDTDAWLQEKVAGLLKAAGFNSHTP 348

Query: 273 GKIKVGKANTKQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTN 332
            ++    AN   A  IA H S  +  LL  ML+ESDNLIAD L K LG R       F  
Sbjct: 349 KRLHTLPAN---AHLIADHQSATMDSLLSEMLKESDNLIADALLKQLGKRKGQDESDFYQ 405

Query: 333 GTQAIKQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLP 392
           G++ +     +  G+ L    L DGSGLSR N +  + +++TL  ++  EA   L   LP
Sbjct: 406 GSKEMAANL-TLLGVDLSSANLVDGSGLSRYNLLNARQLMQTLLLIHHTEAYASLKDGLP 464

Query: 393 SAGESGTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFV 432
            +G+ GTL Y+R   +  +  +++AK+GS+ G  N+AGF+
Sbjct: 465 VSGKDGTLLYKRGFNSLPLKDRVQAKTGSMQGVSNLAGFL 504