Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Dechlorosoma suillum PS

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 96/414 (23%), Positives = 172/414 (41%), Gaps = 26/414 (6%)

Query: 41  LPQGARYSLLIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLM-- 98
           LP G ++++ ++ V      L  N      PAS  K++T  AA  +LG  + + T+L   
Sbjct: 56  LPPG-QFAVAVQAVDAAAPRLLHNAARPMNPASVMKLVTTYAALEKLGPAYTWKTELRGD 114

Query: 99  ---RSGQ---DWIIRFSGDPTLTTADLTTLLKAMKAQSGGR-IEGDLWLDNSVFS--GYE 149
              R G+   +  +  SGDP LT      LL+ ++ ++  R I GDL  D   +    ++
Sbjct: 115 NAPRDGRLEGNLYLVGSGDPALTLERFWLLLRQLRDRAEVRQIGGDLVADRRAYRLPPFD 174

Query: 150 RAVGWPWDILGVCYSAPASAINLDANCIQASIYTE-PQGKTRVYVPEHYPVHVQSQAISV 208
            A      +     +A A+ +N  A  ++ ++  +   G  R+           +  I+ 
Sbjct: 175 PAAFDNEPLRAYNVNADAALVNYTA--LRFTLVPDLAAGSVRLVQEVPQEGLAVNARIAP 232

Query: 209 TQSE----QESLLCDLELTATPENHYTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLL 264
              E    +E L    + T        + G   L     PL  A      Y   +   L 
Sbjct: 233 GAGECGDWREKLTVRFDPTG---KRLDIGGSFPLVCGEKPLHLAPLAGDAYLAGLFRPLW 289

Query: 265 SQLNIELKGKIKVGKANTKQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFY 324
            +L  +  G+++ G A       +    S  L  +++   + S N++A  L  AL     
Sbjct: 290 RELGGQFAGQVREGPAPVGGVP-LLRWESPSLAEIVRDTNKYSSNVMARHLFLALADTPA 348

Query: 325 SQPGSFTNGTQAIKQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAE 384
            +  +     Q ++Q+   + G+S  +  + +GSGLSR++R+  + +L+ L   ++    
Sbjct: 349 GEAATLAGARQGLRQVLAEK-GLSFPELAVENGSGLSRDDRIAARSLLQLLLAAWKSPVM 407

Query: 385 LGLIAMLPSAGESGTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFVMDENQR 438
              +A LP AG  GTL  +R       +G+   K+GS+ G    AG+V D   R
Sbjct: 408 PEFVASLPLAGRDGTL--KRRFGNGSSAGRAHLKTGSIEGVRAWAGYVTDAGGR 459