Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 285 AQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFYSR 344
           A+++A   S PL   L  M+  SDN++A+ + + +     ++P SF+    A+     + 
Sbjct: 273 ARQLAVVQSAPLIQRLSQMMNASDNVMAECIGREVAVAI-NRPQSFSGAVDAVTSRL-NT 330

Query: 345 TGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLY--QHEAELGLIAMLPSAGESGTLQY 402
             I      L D SGLS +NR+  + +  T++        A   L+ +LP AG SGTL  
Sbjct: 331 AHIDTAGAALVDSSGLSLDNRLTARTLDATMQAAAGPDQPALRPLLDLLPIAGGSGTLGE 390

Query: 403 RRSMRAPQI--SGQIKAKSGSLYGTYNMAGFVMDENQRPKT 441
           R    A     +G ++AK+GSL    ++ G + D + R  T
Sbjct: 391 RFLDAATDQGPAGWLRAKTGSLTAINSLVGVLTDRSGRVLT 431



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 18/135 (13%)

Query: 71  PASTQKILTALAAKLELGDKFRFHTDLMRSGQD----WIIRFSGDPTLTTAD-------- 118
           PAST KILTA AA L L  + R  T ++  GQ+     ++  +GDPTL+ A         
Sbjct: 112 PASTNKILTAAAALLTLDRQARISTRVVAGGQNPQGPVVLVGAGDPTLSAAPPGQDTWYH 171

Query: 119 ----LTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAPASAINLDA 174
               +  L++ ++    G     + +D S FSG   A GW    +     AP  A  +DA
Sbjct: 172 GAARIGDLVEQIR--RSGVTPTAVQVDASAFSGPTMAPGWDPADIDNGDIAPIEAAMIDA 229

Query: 175 NCIQASIYTEPQGKT 189
             IQ +     + +T
Sbjct: 230 GRIQPTTVNSRRSRT 244