Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Sphingomonas koreensis DSMZ 15582

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 113/467 (24%), Positives = 201/467 (43%), Gaps = 48/467 (10%)

Query: 17  LSISGFLIASPIYAQ--TPLT----AATTKLPQGARYSLLIEDVALQQNTLELNTHLYYP 70
           LS+     A+P+ AQ  TPL     A   K   G R+ L++ DV  ++  + +N    + 
Sbjct: 5   LSLLALAAATPLAAQQATPLQSRVEAELAKAAPGTRFGLVVTDVQGRE-IVAVNPDQRFI 63

Query: 71  PASTQKILTALAAKLELGDKFRFHTD----LMRSGQDWIIRFSGDPTLTTAD------LT 120
           PAS  KI+T  AA + L    R  T+    +   GQD ++   GD  L++A       L+
Sbjct: 64  PASNTKIVTTAAAYMTLPGIDRPDTEGGATVRIEGQDVVLTGRGDARLSSAADCATDCLS 123

Query: 121 TLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAPASAINLDANCIQAS 180
            L  A+ A++  R+  ++  D ++F     + G  W+ +   Y    SA+ LD N + A+
Sbjct: 124 QLADAIAAKTK-RVR-NITGDATLFPDERWSSGMSWNNIPSPYGTALSALTLDDNELIAT 181

Query: 181 IYTEPQGKTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATP-ENHYTLDGCLALR 239
                 G T       Y + + ++AI+V    +     DL +   P +    L G +A  
Sbjct: 182 ATPGKAGATPGVAHLGY-LTIDNRAITVAAGGKT----DLNVDRLPFDRSIRLTGTIAAD 236

Query: 240 DKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKV--------------GKA---NT 282
             P  ++  + D   Y    +  LL +  +++ G I+               G A     
Sbjct: 237 ATPQKIRMGIDDPAHYAAWRLATLLRERGVKVSGDIRSRYRTPDTSDDPRQRGAALPPRV 296

Query: 283 KQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFY 342
                +A+    PL   ++ + + S NL  + L + +G       GS  +G   ++ +F 
Sbjct: 297 TPPAPLAALTPPPLSEDMRVINKVSQNLHTELLLRRVG--LVKGTGSVADGQVQVEAMF- 353

Query: 343 SRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQY 402
           +  G+       +DGSG+S  NR+ P+ M++ L ++            LP  G  GTL  
Sbjct: 354 AAAGVPRTSWDFSDGSGMSTYNRIAPRGMVKLLHWISAQSWGAAWRETLPVGGVDGTL-- 411

Query: 403 RRSMRAPQISGQIKAKSGSLYGTYNMAGFVMDENQRPKTLFVQFVTD 449
            R  +   + G+I AK+G++  T  +AG++  ++ +  T F  +  D
Sbjct: 412 ARRFKGTVLEGRIFAKTGTINATNALAGYLTAKSGKTLT-FAAYAND 457