Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase from Dyella japonica UNC79MFTsu3.2

 Score =  108 bits (270), Expect = 4e-28
 Identities = 114/448 (25%), Positives = 186/448 (41%), Gaps = 37/448 (8%)

Query: 44  GARYSLLIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLM----- 98
           GAR+ + +  +   +   E +    Y  AST K+ TA  A  ELG  +R  T L+     
Sbjct: 50  GARWGIAVVSLDTGRTLYEHDGDRLYQTASTAKLFTAALALSELGPDYRIPTRLLAHEHV 109

Query: 99  RSGQ---DWIIRFSGDPTL----TTADLTTLLKAMKAQSGGR-IEGDLWLDNSVFSGYER 150
           R+G      ++   GDPTL    +TAD    +    A  G R ++G +  D+S F+    
Sbjct: 110 RNGVLDGPLLLYGMGDPTLGADASTADWADRMAQQAAARGIRTVKGGIVADDSYFASPAM 169

Query: 151 AVGWPWDILGVCYSAPASAINLDANCIQASIYTEPQGKTRVYVPEHYPVHVQSQAISVTQ 210
             GW    L   ++ P+SA+++  N  Q  +   P  + R  V    P     +  +   
Sbjct: 170 GSGWEAADLQSWFAVPSSALSVQEN--QVDVTVAPGAEGRPAVVTQNPADALPEVANRIA 227

Query: 211 SEQESLLCDLELTATPENHYTLD-GCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNI 269
           +    +  D+ L   P +      G +A R      K AV D  +     +   L +  +
Sbjct: 228 TSAHGVRNDINLYRAPGDRTLYAFGHIAARSTAQRFKLAVFDPALLAGEQLRAALMRHGV 287

Query: 270 ELKGKIKV------GKANTKQAQKIASHHSQPLPVLLKTMLQESDNL-------IADTLT 316
            ++G ++         A    A+ IA   S PL  +++  L+ S NL       IA    
Sbjct: 288 AVQGGVRALHWPQNSDALRDDARLIAEVQSPPLAEIVQRGLKRSQNLYLQNLLLIAGVRA 347

Query: 317 KALGHRFYSQPGSFTN----GTQAIKQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVML 372
           +A   +  S P  F      G + ++Q+   + G+    T + +G+GLSR +   P  M 
Sbjct: 348 QAAAMQAASPPTGFLTTENWGLRGLRQLL-EQMGLPPGSTVIEEGTGLSRRDLSTPASMT 406

Query: 373 ETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFV 432
             L +L        L   LP AG  GTLQ+R  MR    +  ++AK+GS+   + MAG+V
Sbjct: 407 RLLSFLAAQSYAHVLFDALPIAGVDGTLQWR--MRDTPANNNLRAKTGSMSLVHCMAGYV 464

Query: 433 MDENQRPKTLFVQFVTDYFPPRSNPEVA 460
                  +  F   + +Y PP   P  +
Sbjct: 465 TTAGGE-RLAFAIMLNNYDPPAGAPSAS 491