Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., Acriflavin resistance plasma membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (711), Expect = 1e-78
 Identities = 265/1053 (25%), Positives = 462/1053 (43%), Gaps = 88/1053 (8%)

Query: 14   TMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMR 73
            T L++L  IL AG+  Y  +P  + P V  P I V   + G SP      +  PLE++  
Sbjct: 14   TTLSMLAIIL-AGLIAYRLLPVSALPQVDYPTIRVMTLYPGASPDVMTSAVTAPLERQFG 72

Query: 74   SIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVT 133
             + G+ +M +T+S G + + L FN+ +++  A   V+ A++ A   LP D   P V    
Sbjct: 73   QMPGLTQMASTSSGGASVITLRFNLDINMDVAEQQVQAAINAATNLLPKDLPAPPVYNKV 132

Query: 134  LAAEQPVLSVVLYGTVP--ERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPL 191
              A+ PVL++ +        +   L+  ++  K+     +  V IAG + + V I V+P 
Sbjct: 133  NPADTPVLTLAITSKTMLLPKLNDLVDTRMAQKIAQISGVGMVTIAGGQRQAVRIKVNPE 192

Query: 192  LMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQ 251
             + + G++ +D+  LI  +N     G  D       +       S KD  EL +      
Sbjct: 193  ALAANGMNLADVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLTSPKDYAELILAYANGA 252

Query: 252  VITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDD 311
             +   DVA +     +    A  +   A++L+I+++ G N+IE V+ +KA+L      D+
Sbjct: 253  PLRLKDVAQIVDGAENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALL--PSITDN 310

Query: 312  WPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTSLLVGVSIPGSF 370
             P  L V  + D ++ ++  + D+Q+ +L AI LVV+V    L  V  +++  V++P S 
Sbjct: 311  LPAGLDVTVLTDRTQTIRASVTDVQHELLIAIALVVMVTFLFLRRVSATIIPSVAVPLSL 370

Query: 371  LTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKR 430
            +    V+ + G +VN + L AL +A G +VD AIV+ E   R ++EG    +A    AK+
Sbjct: 371  IGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENIARFIEEGDSPLQAALKGAKQ 430

Query: 431  MAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVL-GSLF 489
            + + + + T + +A   PLLF  DV G   +   +TL   +  SLV++L   P++   L 
Sbjct: 431  IGFTLISLTLSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTPMMCARLL 490

Query: 490  GRPQKVTQANQARMVALHNGDFSQATG-----ITKAYYSTLAIAIRH-PIKIL--CGALL 541
             R  K  +           G F +A+G     +  AY   L   +RH P+ +L   G+L+
Sbjct: 491  KREPKEEE----------QGRFYRASGAWIDWLIAAYGRKLQWVLRHQPLTLLVAVGSLV 540

Query: 542  MSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFE 601
            ++  +  A  K      FFP  D         +   +S          + +V+L     E
Sbjct: 541  LTVVLYLAVPKG-----FFPVQDTGVIQGISEAPQSISFAAMSERQQQLAKVILADPAVE 595

Query: 602  SVYTRTGGDDEIG-------VVQITPVDWQYRRSVKAIIEELEQVTDTFPGVEI------ 648
            S+ +  G D +         ++ + P   +   S   II  L+   D   G+ +      
Sbjct: 596  SLSSYIGVDGDNATLNSGRLLINLKPHS-ERDDSATEIIARLQPQLDRLVGIRLFMQPVQ 654

Query: 649  -----------EYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSD 697
                       +Y+F  + P  E  L    S R+ + L + A+           LT+++ 
Sbjct: 655  DLTIEDRVSRTQYQFSLSSPDAE--LLSLWSGRLVEALAQQAE-----------LTDVAS 701

Query: 698  NGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYP 757
            +    G+   + I RD ASR     + + + +       +I       S   V +L    
Sbjct: 702  DLQDKGLQVFLVIDRDAASRLGVSVSNITDALYDAFGQRQISTIYTQASQYRV-VLQAQA 760

Query: 758  SEYRDIGRFDQLRVKTAQ-GLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNL 816
             E       DQ+ VKT   G V L++ A++   Q Q  I  +     + +  +L  G  L
Sbjct: 761  GERIGPQALDQIHVKTTDGGQVRLSSLARVEERQAQLAIAHIGQFPAVMMSFNLAPGVAL 820

Query: 817  ALELPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSF 876
               +  IE+  R++ +P  V+   +G  +  + S        + A+  M I+L   + S+
Sbjct: 821  GHAVDVIEKVQRDIGMPVGVQTEFQGAAQAFQASLSSTLLLILAAVVTMYIVLGVLYESY 880

Query: 877  YQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLID-TYNQLL 935
                 IL+ +  + +G    L++     G+I + IG+I L GIV  N I++ID   +   
Sbjct: 881  IHPITILSTLPSAAIGALLALILSGNDLGMI-AIIGIILLIGIVKKNAIMMIDFALDAER 939

Query: 936  KRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQ 995
             +G+  + AI +  + R RP+L+TT+  + G +P++              GA   Q    
Sbjct: 940  NQGVDPQTAIYQAALLRFRPILMTTLAALFGAIPLMFATG---------SGAELRQ---P 987

Query: 996  LATAVAGGLAFATVLTLVLTPCLLM----LGRR 1024
            L   + GGL  + VLTL  TP + +    LGRR
Sbjct: 988  LGLVMVGGLLVSQVLTLFTTPVIYLYFDRLGRR 1020