Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1103 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  300 bits (768), Expect = 4e-85
 Identities = 256/1051 (24%), Positives = 475/1051 (45%), Gaps = 83/1051 (7%)

Query: 18   LLVFILVA-GVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIE 76
            L  F+LV  G  ++ ++P    P++ +PI+ ++V+  G +P++ E  + + +E  +  + 
Sbjct: 16   LAFFVLVVLGWQSFNSLPITRFPNIDVPIVSIAVTQSGAAPAELETQVTKEIEDAVAGVS 75

Query: 77   GVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAA 136
            GV  + +T ++G ++  + F + V   +A+ DV+DA+D  +  LP   +EP V++V +  
Sbjct: 76   GVDHIESTITDGISTTAVIFRMEVPTTQAVQDVKDAIDRIRSDLPTSIEEPIVSKVDVEG 135

Query: 137  EQ-PVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLMES 195
            +     SV   G   E  +  +   ++  ++    I  VD  G  +  V + +D   + S
Sbjct: 136  QAIQTFSVSSPGMTLEELSWFVDDTIKRAIQGQTGIGRVDRYGGSDREVRVELDEDRLNS 195

Query: 196  YGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVITF 255
            +G+  +D+   +   N  + +G    G    +++       +  +    I +   + +  
Sbjct: 196  FGISAADVNAQLRRMNMDLGSGRGQVGGSEQAIRTLGDTRDVTALAGTMISLPNGRFVRL 255

Query: 256  GDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARD-DWPN 314
             ++  V  ++ +P+SF+R +G+P +   + +  G + +   E V   L E +A+  D   
Sbjct: 256  SELGKVIDTYEEPKSFSRFNGQPGVTFAVFRAKGASEVSVAETVGKTLDEIRAKHPDVSI 315

Query: 315  NLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLLVGVSIPGSFLTGL 374
             ++  +++    + +  ++ L   I  A++ V+VV++ +   R +L+  V++P S +   
Sbjct: 316  EMVDDSVYFTYGNYEAAIHTL---IEGAVLAVIVVMLFLRNWRATLISAVALPLSAIPTF 372

Query: 375  LVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAWP 434
             V+ + G ++N+V   A+ +A G+LVD AIV  E  +R ++ G     A  +AA  +   
Sbjct: 373  WVMELLGFSLNLVSFLAMTLATGILVDDAIVEIENIERHIRMGKSPYRAAIEAADEIGLA 432

Query: 435  ITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQK 494
            + A+T T +A F P+ F P + G++     LT+  ++  SL++A L  PV+ +   +P  
Sbjct: 433  VIATTFTIIAVFVPVSFMPGIPGQYFIQFGLTVAVSVFFSLLVARLITPVMAAYLMKPSD 492

Query: 495  VT--QANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFAYGK 552
            V+    ++  M+  +       T      YSTL  A      IL     + A + F  G 
Sbjct: 493  VSGHHDDEGFMMRQYTRLVRFTTKRWYTRYSTLLAA------ILVSVGSVVALLVFVPG- 545

Query: 553  AGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTG---- 608
                  F P  D    S+ +    D  L + DR  ++I   +   D  E+V+   G    
Sbjct: 546  -----SFLPPEDSSRVSLSIELPPDAMLADTDRTTTEIYNRVKDIDGVENVFVLGGASPK 600

Query: 609  GDDEI----------------------GVVQITPVDWQYR---------RSVKAIIEELE 637
            GD E+                       V+  TP+  QY          +    I +E+ 
Sbjct: 601  GDLELRRAAVTVLLEKLDHSLINKVVNDVIGRTPLIGQYLPKLPPAGRIKPQSEIEKEIF 660

Query: 638  QVTDTFPGVEIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSD 697
                + P V +  K  D G   E DL   + +    DLDKA   +      +P L N+S 
Sbjct: 661  ARLRSIPDVRVT-KLNDRG---ERDLSFNLLSSNEADLDKAVATLEADLRRDPLLANVSP 716

Query: 698  NGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVD-----I 752
             G+ P  + +I  R +  SR       +   ++  T    IGD     +   +D     I
Sbjct: 717  EGALPRPELQIRPRDEQMSRLGITTAQISEVIRIAT----IGDIDAQLTKIALDGRLIPI 772

Query: 753  LVRYPSEYR-DIGRFDQLRVKTAQG-LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADL 810
             V+   ++R D+     L+V+TA G  VPL++ A I   +   +I R D  RV+ + ADL
Sbjct: 773  RVQLDRDFRTDLAAIRNLKVQTASGATVPLSSVADINYAEGPSSIKRYDRYRVVKLGADL 832

Query: 811  KEGYNLALELPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILI 870
              G  L        +   + +LP +V+F   G  E Q         A ++ L  + ++LI
Sbjct: 833  PAGVALDTASARFREIAADADLPETVQFLESGDAEVQAEMQESFGNAMLLGLMMVLVVLI 892

Query: 871  TQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDT 930
              F    Q F IL ++  +  GV A L++ Q    + +  IG++ L GIV  N I+L+D 
Sbjct: 893  LLFKDVIQPFTILFSLPLAIGGVAAALILTQNALSMPVL-IGILMLMGIVTKNAILLVDF 951

Query: 931  YNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPST 990
              +++  G+ R  A++  G +R RP+++T++    G+LP  L      + +   F AP  
Sbjct: 952  GIEMMHHGMDRTLAMIEAGRKRARPIVMTSIAMSAGMLPSALG-----VGEGGSFRAP-- 1004

Query: 991  QWWSQLATAVAGGLAFATVLTLVLTPCLLML 1021
                 +A AV GG+  +TVL+LV+ P   ++
Sbjct: 1005 -----MAIAVIGGIIVSTVLSLVVVPSFFLI 1030