Pairwise Alignments
Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021
Score = 296 bits (758), Expect = 5e-84
Identities = 254/1022 (24%), Positives = 454/1022 (44%), Gaps = 43/1022 (4%)
Query: 18 LLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEG 77
++V ILV G+ +Y + + P+ +P++ V+ ++ G SP E I RP+E + +I G
Sbjct: 17 MMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESEISRPIEAALNTIGG 76
Query: 78 VKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAAE 137
+ +T+ + EG + VV++F V VD A +VRD V + K P P V
Sbjct: 77 IDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFPDGVATPQVTRYKPEG- 135
Query: 138 QPVLSVVLYGT---VPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLME 194
Q +LSV + T +PE TT L R + ++L + V + G E V ++VDP +
Sbjct: 136 QAILSVAVSSTSRTLPEITT-LATRVINNRLSVISGVGQVSLIGSSERQVLVVVDPDRLG 194
Query: 195 SYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVIT 254
+YGL S + I N+ AAG + +G + V V + + + +
Sbjct: 195 AYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGFNRIIVAQRNGYPVY 254
Query: 255 FGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWPN 314
+VAT+ + + S A G+ + L I K G N +E V+ + A + +
Sbjct: 255 LSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVEVASAVRREVSALNA-ELTKD 313
Query: 315 NLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGV-RTSLLVGVSIPGSFLTG 373
N+ + D S + ++ +Q ++ +L V+++ L R++++ G+++P S +
Sbjct: 314 NVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWRSTVITGLTLPISVIGT 373
Query: 374 LLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAW 433
+ G T+NI+ L AL +++G+L+D AIVV E R +Q G A D +
Sbjct: 374 FAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKDPVRAALDGTNEIGL 433
Query: 434 PITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQ 493
+ ++T +A F P+ F + G F +T+ + SL ++ P+L S++ PQ
Sbjct: 434 AVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSFTLDPMLSSVWCDPQ 493
Query: 494 KVTQANQARMVALHNGDFSQATGITKAYYSTLAIAI---RHPIKILCGALLMSAAIAFAY 550
A + L G+ Y S + + I I+ G ++S +
Sbjct: 494 SQKTAKRGFFGQLIERFDQWFEGLASRYRSVIYFTFDYRKTTIAIVLGMFVVSLLLV--- 550
Query: 551 GKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTGGD 610
+G EF P D S+ + + SL+ + IE+ + + S Y+
Sbjct: 551 --PRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERALREFNYVSSTYSTINSG 608
Query: 611 DEIG----VVQITPVDWQYRRSVKA-IIEELEQVTDTFPGVEIEYKFPDAGPPVEHDLEI 665
+ G +V + V RR A + + + G+EI L++
Sbjct: 609 EMRGFNKALVAVQLVHSSQRRLKTAETLGPIRRRLSRIAGLEISVGQRSEVVGSIKPLQL 668
Query: 666 EISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAADATLV 725
I ++L + + + A P T + + K + +RR+ AS +
Sbjct: 669 SILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPTLAVRVRREAASDLGVSIATI 728
Query: 726 GNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRD-IGRFDQLRVKTAQG-------L 777
G+T++ + G I + D E D++VR P+ R+ + L + TA+ +
Sbjct: 729 GDTLRSLVAGDAISVWNSPDG-ETHDVVVRLPAAGRENAAQLRNLPIATARMDDNGKPIM 787
Query: 778 VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSVE 837
V L A ++ I R D R I + +++ EG L + ++ A+ ++++P
Sbjct: 788 VLLDQVADVVESTAPAQITRKDLSRDIRISSNI-EGRTLGDVVADLKAAMTKMDIPVGFR 846
Query: 838 FRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGL 897
G E S + ++ +A+ + IIL +QF SF Q I+ + S +GV GL
Sbjct: 847 ISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSFIQPIAIIMTMPLSLMGVLLGL 906
Query: 898 LIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVL 957
L + S IG++ L G+V N I+L+D N ++ G S +++ G RLRP++
Sbjct: 907 LFTGSTLN-MFSMIGIMMLMGLVTKNAILLVDYSNLGVREGKSLRQSLADAGAVRLRPIV 965
Query: 958 LTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPC 1017
+TT+ I G+LP L + E GA + +A A+ GGL +T+L+LV P
Sbjct: 966 MTTLAMIFGMLPTALGLG--------EGGAQR----APMAHAIIGGLISSTLLSLVFVPV 1013
Query: 1018 LL 1019
+L
Sbjct: 1014 VL 1015
Score = 38.9 bits (89), Expect = 2e-06
Identities = 97/505 (19%), Positives = 194/505 (38%), Gaps = 38/505 (7%)
Query: 527 IAIRHPIKILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRI 586
I+I HP+ +++ F+YG+ LG + +PE D P V G + + I
Sbjct: 6 ISINHPVFATMMMVMILVLGLFSYGR--LGVDHYPETDLPVVVVATTYTGASPESVESEI 63
Query: 587 MSDIEQVMLGHDEFESVYTRTGGDDEIGVVQITPVDWQYRRSVKAIIEELEQVTDTFPGV 646
IE + +++ + + I VVQ VD + + + + + + ++ FP
Sbjct: 64 SRPIEAALNTIGGIDTITSESYEGRSIVVVQF-EVDVDSQDAAQEVRDRVARLETKFPDG 122
Query: 647 EIEYKFPDAGPPVEHDLEIEIS--ARVADDLDKAAQQVRLWAEANPALTNLSDNG--SKP 702
+ P + L + +S +R ++ A +V N L+ +S G S
Sbjct: 123 VATPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRV-----INNRLSVISGVGQVSLI 177
Query: 703 GIDWKIDIRRDDASRFAADATLVGNTVQFV--TNGLKIGDYLPDDSDEEVDILVRYPSEY 760
G + + D R A V ++ + N + L ++ + V
Sbjct: 178 GSSERQVLVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRI---VTVEGRI 234
Query: 761 RDIGRFDQLRVKTAQGL-VPLTNFAQIIPEQKQDT-IHRVDGRRVISVMADLKEGYNLAL 818
+ F+++ V G V L+ A I+ + T + G+ + + +G N
Sbjct: 235 ANTSGFNRIIVAQRNGYPVYLSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVE 294
Query: 819 ELPAIEQALRELN---LPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQF-N 874
A+ + + LN +V+ I N S V + +V ++++++ F N
Sbjct: 295 VASAVRREVSALNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLN 354
Query: 875 SFYQAFLILTAVIFSTVGVFAGLLIFQKPFGI-IMSGIGVIALAGIVVNNNIVLIDTYNQ 933
S+ + + S +G FA I+ F + IM+ + + GI++++ IV+ + +
Sbjct: 355 SWRSTVITGLTLPISVIGTFAA--IYALGFTLNIMTLMALSLSIGILIDDAIVVRENITR 412
Query: 934 LLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWW 993
L+ G A L + VL TT+ + LP+ G +++
Sbjct: 413 HLQMGKDPVRAALDGTNEIGLAVLSTTLCIVAVFLPVAF------------MGGLIGRFF 460
Query: 994 SQLATAVAGGLAFATVLTLVLTPCL 1018
Q VA + + ++ L P L
Sbjct: 461 LQFGVTVAVAVVISLFVSFTLDPML 485