Pairwise Alignments
Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H
Score = 273 bits (698), Expect = 5e-77
Identities = 241/1021 (23%), Positives = 456/1021 (44%), Gaps = 48/1021 (4%)
Query: 14 TMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMR 73
T+L+LL ++V G+A + PD+ ++ V+ + G +P + I +E +
Sbjct: 15 TVLSLL--LVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVDTDITEVIENAVA 72
Query: 74 SIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVT 133
+ G++ +T+ + G V+EF GV + +A+ DVRDAV + LP D +EP + +
Sbjct: 73 GVSGIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLPDDIEEPRIAKSD 132
Query: 134 LAAEQPVLSVVLYGTVPERTTVLIA----RQLRDKLESFRQILSVDIAGDREEIVEIIVD 189
++ PV+ + L T P T + + R + D+L + + VD+ G+R + + + +D
Sbjct: 133 TDSD-PVMRLSL--TSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGERRQAIRLWLD 189
Query: 190 PLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEG 249
M + + D+ + N + AG +++ +V+ ++ S + IKV
Sbjct: 190 RRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAFGSTVIKVVD 249
Query: 250 KQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQAR 309
+ DVA V + ++ R++G+ A+ + + ++S N + ++A + + R
Sbjct: 250 GYPLRVRDVARVELGVENDDTTVRVEGRDALTMGVLRQSQANTVAISNRIRAEID--RLR 307
Query: 310 DDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTSLLVGVSIPG 368
P + ++ D++ + ++++ + + ++V++V A LG +R +L+ V+IP
Sbjct: 308 PSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLVPTVTIPV 367
Query: 369 SFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAA 428
+ + + + + G ++N++ L ALI+++G++VD AIVV E RR++ G + A
Sbjct: 368 AVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKLVAAARGT 427
Query: 429 KRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSL 488
+++ + + A++ T +A F P+ F G L + S+++AL P L +
Sbjct: 428 RQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTLCPPLAA- 486
Query: 489 FGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAF 548
V +A H +++ T +++ Y L+ + P+ +L ALL A +
Sbjct: 487 -----GVLAEGKAEGRLAHALNYAFGT-LSRGYQRALSAVLGLPMVVLTVALLCGGASFW 540
Query: 549 AYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIE---QVMLGHDEFESVYT 605
Y GL E P D V + + D + +E Q +L E V
Sbjct: 541 LY--QGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLDRGEAVGVLA 598
Query: 606 RTG--GDDEIGVVQITPVDWQYR-RSVKAIIEELEQVTDTFPGVEIEYKFPDAGPPVEHD 662
+ G G V I DW+ R R+ A+ E L + G P AG +
Sbjct: 599 QVGQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLAGATATPVVP-AGLGLRGS 657
Query: 663 ---LEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFA 719
L++ I +++ A + AE P L N + + + I RD A
Sbjct: 658 RTPLQVVIGGPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQLSVGIDRDRADDLG 717
Query: 720 ADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQG--L 777
+G T+Q + ++ ++ + +V + R P + R V+ +G L
Sbjct: 718 VGVEAIGQTLQTMLASREVTRFVDRGREYQVVVQAR-PEDRRTPSDLSNTFVRAEKGGAL 776
Query: 778 VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSVE 837
VPL + ++R I++ + L GY++ + + AL +P
Sbjct: 777 VPLDALVILKETAGAPDLNRYARLPSITLQSALAPGYDMGQAIDDV-MALASQTVPPEAR 835
Query: 838 FRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGL 897
+ GQ++E ++ + F++AL + ++L QF SF +I+ +V + G L
Sbjct: 836 LSLAGQSKEFLETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSL 895
Query: 898 LIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVL 957
+ S IG++ L G+ N I++++ NQL G S EAIL RLRP+L
Sbjct: 896 WATGNSIN-VYSQIGIVLLIGLTAKNGILIVEFANQLRDEGRSVREAILEAASLRLRPIL 954
Query: 958 LTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPC 1017
+T + TILG +P+ GA S + + V GGL A++LTL +TP
Sbjct: 955 MTVICTILGAVPLAWSSGA---------GAESRE---AIGIVVIGGLGLASLLTLFVTPV 1002
Query: 1018 L 1018
L
Sbjct: 1003 L 1003
Score = 54.7 bits (130), Expect = 3e-11
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 334 DLQNNILSAIILVVVVIIAILGVRTS-----LLVGVSIPGSFLTGLLVLAVFGLTVNIVV 388
+ +L ++ +V++ +L + L++ +S+P + LL L G ++N+
Sbjct: 847 ETSGGVLFTFLMALVIVYLVLAAQFESFLHPLIIMLSVPLAVSGALLSLWATGNSINVYS 906
Query: 389 LFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAWPITASTATTLAAFAP 448
+++ +G+ I++ EFA++ EG EA +AA PI + T+ P
Sbjct: 907 QIGIVLLIGLTAKNGILIVEFANQLRDEGRSVREAILEAASLRLRPILMTVICTILGAVP 966
Query: 449 LLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSL 488
L + E + + + ++ L + ++ L PVL L
Sbjct: 967 LAWSSGAGAESREAIGIVVIGGLGLASLLTLFVTPVLYDL 1006