Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1066 a.a., MMPL family transporter from Rahnella sp. WP5

 Score =  293 bits (751), Expect = 3e-83
 Identities = 260/1061 (24%), Positives = 479/1061 (45%), Gaps = 84/1061 (7%)

Query: 16   LTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSI 75
            + L+V +L++G+  Y  +   + P V  P I V+  + G SP      I  PLE+++  +
Sbjct: 15   ILLMVAVLLSGIFAYNMLSTSALPQVDYPTIQVTTLYPGASPDVMASGITAPLERQLGQM 74

Query: 76   EGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLA 135
             G+ +M +T++ G + + L+F++ + L  A  +V+ A++ A   LP+D   P   +    
Sbjct: 75   AGLSQMYSTSASGSSIITLKFSLDLSLDVAEQEVQAAINAADSLLPSDLPNPPTYKKVNP 134

Query: 136  AEQPVLSVVLYGTVPERTTV--LIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLM 193
            A+  VL++         T V  L+  ++  KL     +  V +AG  +  + + VDP  +
Sbjct: 135  ADAAVLTLAATSESLPLTKVQDLVNTRVALKLSQISGVGMVTLAGGHQPAIRVQVDPRKL 194

Query: 194  ESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVI 253
             ++ L    I  LI  +N   + G  D  +   ++       +  +   L +  E    +
Sbjct: 195  AAHNLSMETINTLIGNSNVNGSKGGFDGPHHSITIDANDQLRTAAEYGNLIVNYENGAAL 254

Query: 254  TFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWP 313
               DVAT+ ++  +    A  + +PAI++ ++++ G N+I+ V+ +KA L + Q  +  P
Sbjct: 255  RLRDVATLSEAAENQYLSAWANKQPAIIISVQRQPGANVIQVVDAIKAQLPKLQ--EALP 312

Query: 314  NNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAIL-GVRTSLLVGVSIPGSFLT 372
             ++ +  I D ++ ++  ++D+Q  +L +I LVV+V    L  V  +L+  V++P S + 
Sbjct: 313  ESVKISVISDRTQTIRASISDVQFELLLSIALVVMVTFLFLRNVAATLIPSVAVPLSLVG 372

Query: 373  GLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMA 432
               V+ + G ++N + L AL +A G ++D AIVV E   RR++EG    +A    ++++ 
Sbjct: 373  TFGVMYLCGFSLNNLSLMALTIATGFVIDDAIVVVENISRRLEEGETPMQAALKGSQQIG 432

Query: 433  WPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRP 492
            + I + T + +A   PLLF  DV G   +   +TL  ++  S+V++L   P+L +   R 
Sbjct: 433  FTIISLTFSLIAVLIPLLFMGDVVGRLFREFAITLAVSILVSMVVSLTLTPMLCAYLLRH 492

Query: 493  QKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHP--IKILCGALLMSAAIAFAY 550
               T   +        G+F     +   Y   L + + H     ++  A L+  A+ +  
Sbjct: 493  ---TPEEKQSKFYRKGGEFFDK--MIAGYDRMLIVVLNHQKLTLLVAAATLVFTALLYVI 547

Query: 551  GKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTGGD 610
               G    FFP  D        ++  D+S +E  R    +   +L   + ESV +  G D
Sbjct: 548  VPKG----FFPSQDTGMIQGITQASQDVSFSEMGRRQQLLTAAILNDPDVESVSSTIGVD 603

Query: 611  D-----EIGVVQITPVDWQYR-RSVKAIIEELEQVTDTFPGVEI------EYKFPDAGPP 658
                    G +QI+   +  R     AIIE L+Q T   PG+E+      +    D   P
Sbjct: 604  GNNTSLNSGRLQISLKSFDERSERAPAIIERLKQETAGVPGIELYMQASQDLTVDDQVTP 663

Query: 659  VEHDLEIE--ISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDAS 716
             ++   ++   S  +     K  +++    E +  ++NL + G        +++ RD A+
Sbjct: 664  SQYQFTLDDADSENLVQWTPKLIEKLSALPEFSEVVSNLQNQGQIA----YVELDRDAAA 719

Query: 717  RFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKT--- 773
            R+   A+ V +T  +   G ++   +   +++   +L   P   +    FD + + T   
Sbjct: 720  RYGITASDV-DTALYNAFGQRLVSTIFTQANQYRVVLEVAPQFQQSPASFDDVYLATNNS 778

Query: 774  --------------------------------AQGLVPLTNFAQIIPEQKQDTIHRVDGR 801
                                              G+V LT+ A+I          R++  
Sbjct: 779  TSTSGTVATTTSTTSSSTSDSGTSTTTTNAGATNGMVKLTSIAKIHMRTGALLQARLNQF 838

Query: 802  RVISVMADLKEGYNLALELPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVA 861
              ++V  +LK+GY+L     AI+  + ++ +P S+  R +G     E +        + A
Sbjct: 839  PAVTVSFNLKDGYSLEQAQQAIKTTVADIAMPDSITLRYQGAAASFESATGNTLWLILAA 898

Query: 862  LAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVV 921
            L  M ++L   + SF     IL+ +  + VG    L+     F +I + IGVI L GIV 
Sbjct: 899  LLTMYVVLGILYESFIHPVTILSTLPSAAVGALLSLIFAGTEFSLI-ALIGVILLIGIVK 957

Query: 922  NNNIVLID-TYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIIN 980
             N I++ID   +   K+GLS  EAI +  + R RP+++TT+  +LG LP++L        
Sbjct: 958  KNAIMMIDFALDAENKQGLSPREAIHQACLLRFRPIMMTTMAALLGALPLMLASG----- 1012

Query: 981  QKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPCLLML 1021
                 GA   Q    L   + GGL F+ VLTL  TP + ++
Sbjct: 1013 ----SGAELRQ---PLGLVIVGGLIFSQVLTLFSTPVIYLM 1046