Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., multidrug transporter MdtB from Phaeobacter inhibens DSM 17395

 Score =  880 bits (2274), Expect = 0.0
 Identities = 464/1020 (45%), Positives = 664/1020 (65%), Gaps = 8/1020 (0%)

Query: 10   SRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLE 69
            +R+R ++ +   +L  G   YL IPKES+PD+ IP +YVS S  GISP D+ERL+V+PLE
Sbjct: 10   ARSRAVMLIFSALLCGGAYAYLNIPKESNPDIPIPFVYVSTSLSGISPDDSERLLVKPLE 69

Query: 70   QEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTV 129
              +  +  +KEM   A EG+ASV LEF  G D+A+A+  VR AVD A+P LP  + EP V
Sbjct: 70   TGLSGLADLKEMKGHAYEGYASVTLEFEAGADVAEALDRVRVAVDQARPDLPEAATEPVV 129

Query: 130  NEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVD 189
             E+  A   PVL+ VL G VPER+   +AR+L  +LE+   +L VDI G R +++E+++D
Sbjct: 130  VEINTALF-PVLTTVLSGPVPERSLNRMARELETRLEALTGVLEVDIGGGRSDLLEVLID 188

Query: 190  PLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEG 249
            P+   +YGL    +   I  NN ++AAG +D   GRF +KVP + +   D++++P+KVEG
Sbjct: 189  PVAFATYGLSFEALVGQINRNNAMIAAGTIDGAAGRFVLKVPGLVDGAADLMQMPVKVEG 248

Query: 250  KQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQAR 309
              V+T GD+A VR+ F DP SFAR++G+PA+ LDI KRSG NIIETV   KAV+   Q  
Sbjct: 249  GAVVTLGDIAVVRRRFEDPRSFARINGQPALTLDITKRSGANIIETVAAAKAVIATGQ-- 306

Query: 310  DDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLLVGVSIPGS 369
             DWP ++ V  + DES +V+ ML DL+ N+++AI+LV++V+I  LG+R +LLVG+SIPG+
Sbjct: 307  QDWPQSVRVDYLLDESREVETMLGDLEANVVAAIVLVMLVVIYALGLRPALLVGLSIPGA 366

Query: 370  FLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAK 429
            FL G+ +L   G+T+NIVVLF+LI+ VGMLVDGAIV TE ADR +QEG   +EAYR AA 
Sbjct: 367  FLAGVALLWAMGITMNIVVLFSLILVVGMLVDGAIVTTELADRYLQEGRTAAEAYRAAAG 426

Query: 430  RMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLF 489
            RMA P+ +STATTL+ F PLLFW   TGEFMK+LP+T++ TL ASL+MAL+F+PVLG + 
Sbjct: 427  RMAGPLVSSTATTLSVFVPLLFWTGTTGEFMKFLPITVIVTLAASLLMALVFIPVLGGMI 486

Query: 490  GRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFA 549
             R    + A +  + A  +GD     G+   Y   L  A+  P   +  ++ +       
Sbjct: 487  ARRSPQSAAAKQALHAAEHGDPRLGRGMAGIYARMLQRALLFPGTTVLLSVALLLGTFGL 546

Query: 550  YGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRT-- 607
            YGK G+G  FFPEV+P F  V++R+  + S++E+D ++  +E  +L      SVY  T  
Sbjct: 547  YGKYGVGLTFFPEVEPEFMQVQLRARDNFSIHERDALVRVVEDQLLQTAGITSVYAVTSL 606

Query: 608  -GGDDE--IGVVQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKFPDAGPPVEHDLE 664
             GGDD   IG +Q+    W  R     I   +       PGVE+  +  D GP  +  L+
Sbjct: 607  GGGDDLDLIGTIQLELDPWDQRPPAAEIGAGIRAEVADLPGVEVRVETEDDGPSSDKPLD 666

Query: 665  IEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAADATL 724
            + I+AR +   + A  Q+R         T+++D+ + PG++W+I+I R +A+R+ AD  L
Sbjct: 667  LHITARDSSVAEAAVAQIREIMTGIGGFTDVADSRALPGVEWRIEIDRAEAARYGADLNL 726

Query: 725  VGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQGLVPLTNFA 784
            +G TVQ +T+G+ +  + PDD  E VD+ VR+P+  R       LRV TA GLVP+ NF 
Sbjct: 727  LGQTVQLLTHGVMVTSFRPDDVAESVDVRVRFPAAERSFDGLRALRVPTASGLVPIANFT 786

Query: 785  QIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSVEFRIRGQN 844
            +  P  +  +I R D  RV+++ A++  G     ++  + QA+   +LP  V +R +G+ 
Sbjct: 787  RFAPVPRSGSIERRDQSRVLTLSANVAPGLLADAQIERLRQAMVVADLPDGVSWRFKGEA 846

Query: 845  EEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPF 904
            EEQ+ +  FL  AF+ A+  MA+ILI QFNSFYQA ++++A++FS  GV  GLL+  +PF
Sbjct: 847  EEQDAAMRFLLLAFVTAVVLMAVILIAQFNSFYQAAVVMSAIVFSIAGVLLGLLVAGRPF 906

Query: 905  GIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTI 964
            G++M GIGVIALAGIVVN NIVLIDTYN     G S  EA LR G  RLRPV+LT++TT+
Sbjct: 907  GVVMGGIGVIALAGIVVNTNIVLIDTYNAQRSAGQSPCEAALRAGALRLRPVVLTSLTTV 966

Query: 965  LGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPCLLMLGRR 1024
            LGL+PMVL M +D++   + FGAPS+QWW++L+T +AGGL  AT+LTL++TP +L+LG R
Sbjct: 967  LGLMPMVLGMKLDLLTGSMVFGAPSSQWWTELSTTIAGGLVAATLLTLLVTPAMLVLGTR 1026