Pairwise Alignments
Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1268 a.a., multidrug resistance protein MdtC from Phaeobacter inhibens DSM 17395
Score = 440 bits (1131), Expect = e-127
Identities = 221/499 (44%), Positives = 339/499 (67%), Gaps = 7/499 (1%)
Query: 1 MFTLIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDA 60
M ++ A R R +L + L+ G Y ++PKE PD+ IP +++SV GIS DA
Sbjct: 1 MTGIVSWAAERARMILAFIAISLLVGGFAYASLPKEGEPDIEIPALFISVPFPGISAEDA 60
Query: 61 ERLIVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKL 120
E L+V+ +E E+ ++G+ +M++TA+EG+ V LEF+ G D MADVRDA+D A+
Sbjct: 61 ETLLVKVMETELADLDGLDKMSSTAAEGYGGVALEFDFGWDKTAIMADVRDAMDAAEADF 120
Query: 121 PADSDEPTVNEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDR 180
P +++ T+NE+ + E P++ V L G VPERT IA+ L+D LE+ +L IAG+R
Sbjct: 121 PEGAEKYTINEINFS-EFPIVIVNLTGAVPERTMARIAKDLQDDLEALEPVLEAGIAGNR 179
Query: 181 EEIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDV 240
+E+VE+++DPL +E+Y + ++ ++ NN+++AAG V++ G FSVK+PS F+ ++D+
Sbjct: 180 DEMVEVLIDPLRLEAYNVTALELITVVQNNNQLIAAGEVESNQGTFSVKIPSSFDEVRDI 239
Query: 241 LELPIKVEGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVK 300
ELPIK G +V+T G++AT+ +F D AR +G+ + L + KR G N+I+TV+LVK
Sbjct: 240 YELPIKTNGDRVVTLGELATINFTFEDRRGTARFNGEDTVALQVVKRKGYNLIDTVDLVK 299
Query: 301 AVLGEAQARDDWPNNLL----VKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGV 356
L EA+ + WP L V T D+S V M+ L+ ++L+A+ LV++V+++ LG
Sbjct: 300 ETLAEAKTK--WPPELTAAVSVGTSNDQSRVVASMVGQLEGSVLTAVALVMIVVLSALGS 357
Query: 357 RTSLLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQE 416
R +LLVG +IP SFL +LAV G++++ +V+F LI+AVGMLVDGAIVV E+AD+R++E
Sbjct: 358 RAALLVGFAIPTSFLLCFALLAVMGISISNIVMFGLILAVGMLVDGAIVVVEYADKRIKE 417
Query: 417 GMHRSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLV 476
G AY +AA+RM WP+ +STATTL AF P+LFWP V GEFM LP+TL+ L+ASLV
Sbjct: 418 GSGPMHAYVEAAQRMFWPVVSSTATTLCAFLPMLFWPGVPGEFMGMLPVTLIFVLSASLV 477
Query: 477 MALLFVPVLGSLFGRPQKV 495
+AL+++PV+G + GR ++
Sbjct: 478 VALIYLPVMGGVTGRMSRL 496
Score = 263 bits (672), Expect = 6e-74
Identities = 222/767 (28%), Positives = 339/767 (44%), Gaps = 131/767 (17%)
Query: 360 LLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMH 419
+L +PG F+ L V +F L+ ++VV + +G V G + R+ E +
Sbjct: 450 MLFWPGVPGEFMGMLPVTLIFVLSASLVVALIYLPVMGG-VTGRM-------SRLFENL- 500
Query: 420 RSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMAL 479
S+ R A W + A A P++ W G M+ L + + S V AL
Sbjct: 501 -SDGLRAVAP---WWLRA-------ALVPVMLWGMFAGA-MQMLNGSYLLPADVSDVAAL 548
Query: 480 LFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYST-LAIAIRHPIK--IL 536
+F ++ L VT +LH + S G + + + +P+ +
Sbjct: 549 IFGALIFVLASFGASVTLG----AASLHRRETSVGAGYKHTPFGHFIKFIVGNPVMPLVA 604
Query: 537 CGALLMSAAIAFA-YGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVML 595
GA+ S F + G EFF E +P + VR+ G+ SL E+D ++ EQV+L
Sbjct: 605 IGAVAFSIMTVFTLFSTNNYGVEFFVESEPEQATAYVRARGNTSLMEEDEMVRQTEQVIL 664
Query: 596 GHDEFESVYTRTGGD-------------DEIGVVQITPVDWQYR-------------RSV 629
H +V++ G D +G VQ + W+ R R V
Sbjct: 665 SHPAVVNVFSFAGEGGLNTDASGAQTPPDTVGQVQFEIIPWEDRPTQTETWFNGWFTREV 724
Query: 630 KA-------IIEELEQVTDTFPGVEIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQV 682
A +IEE+ PG E E + GP + + + D L A Q
Sbjct: 725 TATDFDGDTVIEEINTELAKLPGFEAEIRALAQGPASGKPIHLRLKGDRWDTLTAATQSA 784
Query: 683 RLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYL 742
R + P L + D+ PGIDW+ID+ + A R+ AD VG VQ VT G+ +
Sbjct: 785 RARFDDTPGLDLIEDSLPLPGIDWQIDVDVEKAGRYGADVASVGAMVQLVTRGILLDTMR 844
Query: 743 PDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQGLVPLTNFAQIIPEQKQDTIHRVDGRR 802
D SDEE++I VR P E R + D ++++T GLVPL+NF P K + I+RV +R
Sbjct: 845 VDSSDEEIEIRVRLPEEDRVLSTLDVMKLRTEDGLVPLSNFISRQPVPKLEQINRVQQQR 904
Query: 803 VISVMADLKEGYNLALE-----------------LPAIEQALRELNLPSSVEFRIR---- 841
V AD++ G + + + + +L PS ++R
Sbjct: 905 YYDVKADIEPGLSKVITTGGNSGEEETLAYVKSFAEGSDTSASDLTGPSGAPLKLRSLAS 964
Query: 842 GQNEEQEHSAVFLEKAFMVALAAMAIILITQF---------------------------- 873
N E SA+ + + A I +T++
Sbjct: 965 ADNLEAVQSALDDDARVVALNANERIAALTKWLETDPLPKDITWEWTGDQEEQAESGAFL 1024
Query: 874 -NSFYQAFLILTAVIFSTVGVF--------------AGLLI----FQKPFGIIMSGIGVI 914
+F A ++ ++ + F G+LI Q+PF IIM+G G++
Sbjct: 1025 MKAFAGALALMFVILLAQFNSFYNSVLVLLAVVLSTTGVLIGMMVMQQPFSIIMTGTGIV 1084
Query: 915 ALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEM 974
ALAGIVVNNNIVLIDTY + ++ + R EAI+RT R+RPVLLTT+TT+ GL PM+ +
Sbjct: 1085 ALAGIVVNNNIVLIDTYQEYAQK-MPRIEAIIRTAEARIRPVLLTTITTMAGLAPMMFGL 1143
Query: 975 NIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPCLLML 1021
++D IN +P++ WW QLATAV GL AT+LTL++TP LL +
Sbjct: 1144 SLDFINGGYSIDSPTSLWWKQLATAVVFGLGIATILTLLVTPSLLAI 1190
Score = 55.5 bits (132), Expect = 2e-11
Identities = 96/447 (21%), Positives = 179/447 (40%), Gaps = 46/447 (10%)
Query: 548 FAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRT 607
FAY A L E P+++ P + V G +S + + ++ + + L + + T
Sbjct: 28 FAY--ASLPKEGEPDIEIPALFISVPFPG-ISAEDAETLLVKVMETELADLDGLDKMSST 84
Query: 608 GGDDEIGVVQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEY--------KFPDAGPPV 659
+ GV W + + + ++ FP +Y +FP +
Sbjct: 85 AAEGYGGVALEFDFGWDKTAIMADVRDAMDAAEADFPEGAEKYTINEINFSEFPIVIVNL 144
Query: 660 EHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFA 719
+ AR+A DL + + EA A ++ ID R +A
Sbjct: 145 TGAVPERTMARIAKDLQDDLEALEPVLEAGIA------GNRDEMVEVLIDPLRLEAYNVT 198
Query: 720 ADA--TLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKT-AQG 776
A T+V N Q + G + + V+ PS + ++ +L +KT
Sbjct: 199 ALELITVVQNNNQLIAAG--------EVESNQGTFSVKIPSSFDEVRDIYELPIKTNGDR 250
Query: 777 LVPLTNFAQI--IPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPS 834
+V L A I E ++ T R +G +++ ++GYNL + +++ L E
Sbjct: 251 VVTLGELATINFTFEDRRGTA-RFNGEDTVALQVVKRKGYNLIDTVDLVKETLAEAKTKW 309
Query: 835 SVEFRIR---GQNEEQEHSAVF----LEKAFMVALAAMAIILITQFNSFYQAFLILTAVI 887
E G + +Q LE + + A+A + I++++ S A L+ A+
Sbjct: 310 PPELTAAVSVGTSNDQSRVVASMVGQLEGSVLTAVALVMIVVLSALGS-RAALLVGFAIP 368
Query: 888 FSTVGVFAGLLIFQKPFGIIMSGI---GVIALAGIVVNNNIVLIDTYNQLLKRGLSREEA 944
S + FA L + GI +S I G+I G++V+ IV+++ ++ +K G A
Sbjct: 369 TSFLLCFALLAVM----GISISNIVMFGLILAVGMLVDGAIVVVEYADKRIKEGSGPMHA 424
Query: 945 ILRTGVQRLRPVLLTTVTTILGLLPMV 971
+ + PV+ +T TT+ LPM+
Sbjct: 425 YVEAAQRMFWPVVSSTATTLCAFLPML 451