Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  309 bits (792), Expect = 6e-88
 Identities = 257/1051 (24%), Positives = 479/1051 (45%), Gaps = 57/1051 (5%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            L D ++ R      + + ++  G+ ++  +P    P++  PI+ V  +++G S +  E  
Sbjct: 3    LTDLSVKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVESR 62

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            I + +E  +  +EG++ + +++S+G +SV LEF+VG D+  A  DVRD +      LP +
Sbjct: 63   ITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLPEE 122

Query: 124  SDEPTVNEVTLAAEQPV-LSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREE 182
            +D P V +     E  + L++V       + T    R L D+      + ++ I G +  
Sbjct: 123  ADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGKVY 182

Query: 183  IVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLE 242
             + + +D   + +  L  SDI +++   N  + AG V++    F+V++   F++ +D   
Sbjct: 183  AMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDFNN 242

Query: 243  LPIKVEGKQ--VITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVK 300
            L +  EG+   +I  GDVA V     +     R + +  I L I K+S  N +E      
Sbjct: 243  L-VLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAAN 301

Query: 301  AVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTS 359
            A++ +       P  + +K  +D S  ++  + ++   +  A+ LV+VVI   LG VR  
Sbjct: 302  ALVDKINPT--LPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAM 359

Query: 360  LLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMH 419
            L+  +++P S +   +VL   G T+N++ L A+I+A+GM+VD AIVV E   RR++EG  
Sbjct: 360  LIPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDS 419

Query: 420  RSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMAL 479
              +A    ++ +A+ + A+T   +A F P+ F     G+  K   + + A +  S ++AL
Sbjct: 420  PLKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVAL 479

Query: 480  LFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGA 539
               P++ S   +P         ++ A  N        ++  Y +TL  A+ HP       
Sbjct: 480  TLSPMMCSKLLKPAGQDPWLVRKIDAGMN-------WLSAGYRATLKRAMIHP------- 525

Query: 540  LLMSAAIAFAYGKAG-----LGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIE--- 591
             ++S+ +  A G +G     +  EF P+ D     + V      S       M +IE   
Sbjct: 526  FIVSSLVVIALGLSGYLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRL 585

Query: 592  QVMLGHDEFESVYTRT------GGDDEIGVVQITPVDWQYRRSVKAIIEELEQVTDTFPG 645
              ++   + + +  R         +   G+  I   DW  RRS   II ++        G
Sbjct: 586  MPLVDSGDIKRLLIRAPRGFGRSANFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLAG 645

Query: 646  VEIEYKFPDA-GPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGI 704
            V        A G  V   ++  +     ++L K    +   A+ NP L  L  +  +   
Sbjct: 646  VRAFPVMRQAFGRGVGKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKP 705

Query: 705  DWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYR--- 761
              ++ I +D A+      + +G T++ +     +  ++ D   EE D+++    + +   
Sbjct: 706  QLRVVIDKDRAADLGVSISHIGRTLESMLGSRLVTTFMRD--GEEYDVIIEGNRDNQNTA 763

Query: 762  -DIGRFDQLRVKTAQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALEL 820
             D+     +R   ++ L+PL N   +        ++R +  R I++ A+L +GY+L   L
Sbjct: 764  SDLSNI-YVRSDRSRELIPLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEAL 822

Query: 821  PAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAF 880
              +   L    LP+      +GQ+ + + S   +   F++AL  + ++L  QF S+    
Sbjct: 823  DYLNN-LAYTYLPAEAVISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPM 881

Query: 881  LILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLS 940
            +I+  V  +T+G   GL +  +    I S IG+I L G+   N I++++  NQL  +G+ 
Sbjct: 882  VIMLTVPLATLGALIGLWVTGQSLN-IYSQIGIIMLVGLAAKNGILIVEFANQLRDKGIE 940

Query: 941  REEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAV 1000
             + AI++   QRLRP+L+T +TT  G +P+VL        + +            +   V
Sbjct: 941  FDTAIIQAASQRLRPILMTGITTAAGAIPLVLAQGAGAETRFV------------IGVVV 988

Query: 1001 AGGLAFATVLTLVLTPCLLMLGRRRKGVSED 1031
              G+  AT  TL++ P    L  R  G  E+
Sbjct: 989  LSGIILATFFTLLVIPVAYGLIARNTGSPEE 1019