Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  272 bits (696), Expect = 8e-77
 Identities = 241/1042 (23%), Positives = 477/1042 (45%), Gaps = 59/1042 (5%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            +I A +   R    ++  ++VAG+    ++P+   P +T     V   + G S    E L
Sbjct: 1    MIKALVENGRLASLVIALLIVAGLGAITSLPRMEDPSITNRFASVVTHYPGASAERVEAL 60

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGV-DLAKAMADVRDAVDLAKPKLPA 122
            +   LE ++R +E +K + +T+  G + + LE    + +     +  RD V+ AK  LP 
Sbjct: 61   VTEVLENQLRRLEELKLVQSTSRPGISVIQLELKDRITETDPVWSRARDLVNDAKNLLPP 120

Query: 123  DSDEPTVNEVTLAAEQPVLSVVLYGTVPERTTVL--IARQLRDKLESFRQILSVDIAGDR 180
             +    +++    A   +L +V  G    R  +L   A++L+ +L        V + G  
Sbjct: 121  AAQNALLDDQLGYANTAILGLVWQGAGEPRQDILNRYAKELQSQLRLIPGTDFVKLYGAP 180

Query: 181  EEIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDV 240
             E + + +D   +   GL  + I  ++A  +  V+AG +     R  V+V    +S+  +
Sbjct: 181  TEEILVQIDAQNVNRIGLSAAAIAQILANADTKVSAGEITNDAFRALVEVSGELDSVTRI 240

Query: 241  LELPIKV-EGKQVITFGDVATVRKSFRDPE-SFARLDGKPAIVLDIKKRSGENIIETVEL 298
             ++P+KV E  Q+I  G+VA+V++  + P  S A ++    I++  +  +   +   ++ 
Sbjct: 241  RQVPLKVDENGQIIRLGEVASVQRQPKTPAASIALIEQAQGIMVSARMLNNTRVDLWLQQ 300

Query: 299  VKAVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRT 358
            V  V+ + Q   D  +N+ ++ ++D+       L+DL  ++L   I+++VV++  LG+R 
Sbjct: 301  VHRVVEKVQG--DLSSNVEIQWLFDQEGYTTTRLSDLIASLLLGFIIILVVLMLTLGLRN 358

Query: 359  SLLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGM 418
            +++V +S+P + L  L  +   GL ++ + +  L++A+G++VD AIV+ +   +R ++G+
Sbjct: 359  AVIVSLSLPLTALFTLACMKYVGLPIHQMSVTGLVVALGIMVDNAIVIVDAIAQRRRQGL 418

Query: 419  HRSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMA 478
             R  A  +  K +  P+  ST TT+ AF P++  P   GEF+  + ++++  L  S +++
Sbjct: 419  DRLSAVGETLKHLWLPLAGSTITTMLAFTPIILMPGAAGEFVGGIAISVIFALLGSYLIS 478

Query: 479  LLFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCG 538
               +      FG     T   Q  +             I +A+  TL IA++ P  +L G
Sbjct: 479  HTLIAGFAGRFGAEGDATHWYQRGV---------NFPIIARAFSKTLHIALKRP--LLAG 527

Query: 539  ALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHD 598
             ++    I        +  +FFP  D   F ++V      S+     ++  I+  +    
Sbjct: 528  VVIGILPITGFIASGQMTEQFFPPSDRDMFQIEVHLAPQSSIENTRALVERIDAKLRATG 587

Query: 599  EFESVYTRTGGDDEIGVVQITPVDWQYRRSVKAIIE--ELEQVTDTFPGV--EIEYKFPD 654
            E + +    GG+       +           +A+I+  + E+     P +  +++ +FP+
Sbjct: 588  EMQRLDWVIGGNAPSFYYNLLQRQQGAANYAQAMIKVADFERANQLIPRLQTQLDAEFPE 647

Query: 655  A---------GPPVEHDLEIEISARVADDLDKAAQQVR--LWAEANPALTNLSDNGSKPG 703
            A         GPP    +E+ I     D L +   +VR  L    +   T  + +   P 
Sbjct: 648  AQILVRKLEQGPPFNAPVELRIYGHNLDTLREIGDEVRRILITTDHVLHTRATLSAGAPK 707

Query: 704  IDWKIDIRRDDASRFAA-DATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRD 762
            + ++++   +DAS+ +    T + N +Q  T G+  G  L  +  E + I VR     R+
Sbjct: 708  VWFQVN---EDASKMSGLSLTDIANQIQMATTGINGGSIL--EQTESLPIRVRTQDLMRE 762

Query: 763  -IGRFDQLRVKTAQGL-VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALEL 820
                  Q+ + ++ G+ +PL+  A    +     I R DG+RV ++ A L+        L
Sbjct: 763  QQTELSQINLLSSNGVGIPLSALASSRIDVSLGAIPRRDGQRVNTIEAYLESDVLPQQVL 822

Query: 821  PAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSF-YQA 879
               +  +  L LP+     + G++ ++  +   L    ++ +  +   ++  FNSF    
Sbjct: 823  NQAKTRIDALTLPAGYRIEVGGESAKRNEAVGNLLSNIVLVITLLLATVVLSFNSFRLTG 882

Query: 880  FLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGL 939
             ++L+AV  + +G+ A + +F  PFG  +  IG++ L G+ +N  IV++     +  R  
Sbjct: 883  IILLSAVQSAGLGLLA-VYLFNYPFGFTVI-IGLLGLMGLAINAAIVILAELEDMPDRRE 940

Query: 940  SREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATA 999
            +  +AI++      R +  TT+TTI G LP+++                   +W   A A
Sbjct: 941  ASIDAIVQVVSSCGRHIGSTTITTIGGFLPLII---------------AGGGFWPPFAIA 985

Query: 1000 VAGGLAFATVLTLVLTPCLLML 1021
            +AGG A  T+L+LV  P +  L
Sbjct: 986  IAGGTALTTLLSLVWVPTMYQL 1007