Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1049 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  295 bits (756), Expect = 9e-84
 Identities = 260/1060 (24%), Positives = 497/1060 (46%), Gaps = 90/1060 (8%)

Query: 5    IDAALSRTRTMLTLLVF-ILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            I A  +R      LL+F +L+ G+ + + I KE  P   +  + ++V++ G +P + E  
Sbjct: 9    IIAWFARNSVAANLLMFALLIGGLFSTVLINKEVFPSFELNYLQITVAYPGAAPQEIEEG 68

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            I   +E+ ++ I G+K++T+ ASEG  SV +E   G D    + + +  +D A    P +
Sbjct: 69   INIKIEEAIQDISGIKKVTSVASEGSGSVTIEVEDGFDAQDILDEAKLRID-AIATFPDN 127

Query: 124  SDEPTVNEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEI 183
             ++P +  +    E  V+ V +YG +       +A+ +R+++ +   +    + G R+  
Sbjct: 128  IEKPNIFRIK--PENNVIWVSVYGDMNLHEMKELAKSIREEITALPAVTRAQVTGVRDYE 185

Query: 184  VEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLEL 243
            + I V    +  YGL  +D+   +  ++  +  G +    G   ++      +  D  ++
Sbjct: 186  IGIEVSEDKLREYGLSFADVAMAVRNSSIDLPGGSIRAEDGDILLRTKGQAYTGDDFAKI 245

Query: 244  PIKV--EGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKA 301
             +K   +G +++   +VA +R  F +   + R +GKPA ++++     +N ++    VKA
Sbjct: 246  VVKTRKDGSRIM-LPEVANIRDDFEERLEYTRFNGKPAAIIEVLSVDDQNALDISSQVKA 304

Query: 302  VLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLL 361
             + E +A    P +  + T  D +  +K  LN + +N+    +LV +++   L +R +  
Sbjct: 305  YVEERRAT--LPASAQLDTWGDLTHYLKGRLNMMLSNMFYGALLVFIILALFLDLRLAFW 362

Query: 362  VGVSIPGSFLTGLLVLAV--FGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMH 419
            V + +P  FL  +L++ +  F L++N++ LFA I+ +G++VD AIV+ E A   ++   H
Sbjct: 363  VMMGLPVCFLGAMLLMPLEPFSLSINMLTLFAFILVLGIVVDDAIVIGESAYTEIERHGH 422

Query: 420  RSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMAL 479
              +     A ++A P T    TT+AAF P+L          K + L ++  L  SLV + 
Sbjct: 423  SLDNVIKGAHKVAMPATFGVLTTIAAFIPMLMVSGPMAIIWKSIGLVVILCLAFSLVESK 482

Query: 480  LFVPV-LGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILC- 537
            L +P  L  L  R          R     N        I  +Y S +   I H   ++  
Sbjct: 483  LILPAHLAHLKPRRPSPNPNLFVRFKTALNNKVQHF--IHHSYRSFIGRCIEHRYNVVAT 540

Query: 538  --GALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVM- 594
              G L++S A+  A GK      FFP++   F  V++      S     +++ +IE  + 
Sbjct: 541  FVGVLILSVALV-ASGKVRW--VFFPDIPSDFIQVRLEMDVGSSEANTLKVVKEIENALY 597

Query: 595  LGHDEFESVYTRTGGDDEIG--VVQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKF 652
            + +D+ E         DE G  VV+ + ++   R S     E  +       GV I   +
Sbjct: 598  VMNDQME---------DEYGYPVVKHSFINMGSRTSAFIFAELTKGEDRDVDGVTIADAW 648

Query: 653  PDAGPPVEHDLEIEISARVAD---------------DLDKAAQQVRLWAEANPALTNLSD 697
              A P +    ++ I+A   D                L +AA +++        + ++SD
Sbjct: 649  RKALPELISVKKLNINASTNDAGGDISFRLTSSDLEQLSQAADELKQKLRTYEGVYDISD 708

Query: 698  NGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDD-----SDEEVDI 752
            N S    + ++ I+         +A  +G T+  + + ++ G Y  +      + EEV +
Sbjct: 709  NYSSGSHEIRLAIK--------PEAEALGLTLSDLASQVRYGFYGYEAQRILRNKEEVKV 760

Query: 753  LVRYPSEYR-DIGRFDQLRVKTAQGL-VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADL 810
            +VRYP E R  +G  + + ++T QG  VP ++ A I       +I RVDGRR I+V+A+ 
Sbjct: 761  MVRYPLEQRRTLGHLENMMIRTPQGTSVPFSSVADIELGDSYSSITRVDGRRAITVIANA 820

Query: 811  KEGYNLALE---------LPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVA 861
             +      +         LP +E   R ++        + G + +++ + + L + F  A
Sbjct: 821  NKNVVEPSKVVGEIQKDFLPYLESKYRHISTT------LDGGSADEQSAMIGLIQGFFFA 874

Query: 862  LAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVV 921
            +  +  ++     S+ Q  +I++ + F  +G   G  I      ++ S  G++ALAG+VV
Sbjct: 875  MFTIYALMAIPLKSYSQPLIIMSVIPFGIIGALFGHFILGLSMSVL-SLCGIVALAGVVV 933

Query: 922  NNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQ 981
            N++++L+D  N+   +GL  ++A +  G  R R ++LT++TT +GL+P++LE ++     
Sbjct: 934  NDSLILVDFVNRARAQGLPLKDAAIDAGCYRFRAIILTSMTTFVGLVPIILERSL----- 988

Query: 982  KIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPCLLML 1021
                     Q    +AT++A G+ F+TV+TLVL P L ++
Sbjct: 989  -------QAQIVIPMATSLAFGILFSTVVTLVLVPVLYII 1021