Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1028 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

 Score =  300 bits (767), Expect = 5e-85
 Identities = 272/1054 (25%), Positives = 481/1054 (45%), Gaps = 83/1054 (7%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            L++ +L++   ML L   ++ AG+  +  +P ++ PDV+   + + +   G++P + E  
Sbjct: 5    LVEFSLAQRLLMLVLTALLVGAGIMAFHNLPIDAFPDVSTTQVKIIMKAPGMTPEEVEAR 64

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            IV P+EQEM  I   + +  T+    A V ++F  G D+  A   V  A  L   +LP  
Sbjct: 65   IVVPIEQEMLGIPKQRILRTTSKYAIADVTIDFEDGTDIYWARQQV--AERLGGVELPPG 122

Query: 124  SDEPTVNEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEI 183
            +        T  +E  + +V    ++ E+ T+L    +R +L + R +  V+  G   + 
Sbjct: 123  ASGGLAPITTPLSEMFMFTVEGPLSLEEKRTIL-DWTIRPQLRTLRGVADVNSLGGHAKA 181

Query: 184  VEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLEL 243
             E++ D   + + G+  +++   +  NNR   AG +  G     V+V     SL+D+  +
Sbjct: 182  FEVVPDAAALNARGVSLNELRQAVEGNNRNDGAGRLTEGEETLLVRVEGAVRSLEDLRAI 241

Query: 244  PIKVEGKQVITFGDVATVRKSFRDPESFARLDGK----PAIVLDIKKRSGENIIETVELV 299
             I   G   +  GDVA VR            DG+      +VL ++   G N  + V+ V
Sbjct: 242  VIAQRGGNPVRVGDVAEVRFGALTRYGAVTKDGQGEAVEGLVLGLR---GANAQQVVDQV 298

Query: 300  KAVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRT 358
            KA L E QA    P  + +   +D    V+  +  +   +  AI+LVV++++A LG +R 
Sbjct: 299  KAKLAEIQA--TLPEGVSIVPFYDRGHLVERAVGTVSKALGEAIVLVVILLLAFLGNLRA 356

Query: 359  SLLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGM 418
            +L+V V +P S L   +++  FGL+ N++ L  L +A+GMLVD A+V+ E  +  +    
Sbjct: 357  ALVVSVILPLSALLTFILMQYFGLSANLMSLGGLAIAIGMLVDAAVVIVENVESHL-SSP 415

Query: 419  HRSE-------AYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATL 471
            H S         YR + + +  P+ +  A  +  F PLL    + G+    + LT++  L
Sbjct: 416  HTSARLPLLHVIYR-SVREVTVPVASGIAIIVIVFVPLLTLEGLEGKLFIPVALTIVFAL 474

Query: 472  TASLVMALLFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITK---AYYSTLAIA 528
             +SL++AL  +P L S+                 +  G   +A  + K   AY   L  A
Sbjct: 475  VSSLLLALTVIPALASML----------------MQRGGHHEAWLVQKLNAAYAPALDWA 518

Query: 529  IRHPIKILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMS 588
            + H  +++  AL +      AY    LG  F P +D     +++     +SL E      
Sbjct: 519  LAHTRQVVVAALALLVLAIGAY--TLLGKTFLPTMDEGDLIIQLEKLPSISLEETVETDQ 576

Query: 589  DIEQVMLGH-DEFESVYTRTGGD----DEIGVVQ------ITPVDWQYRRSVKAIIEELE 637
             +++ +L    E +++  R G D    D +G+ Q      + P+D   +     + ++L 
Sbjct: 577  RVQRAILERVPEVKNIIARVGSDELGLDPMGLNQTDTFLVLKPIDEWRQPDKDWLTDQLR 636

Query: 638  QVTDTFPGV------EIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPA 691
            QV + FPG+       I+ +  +    V  D+ +++     D L+ AA  +    +    
Sbjct: 637  QVMEDFPGIAYTFTQPIDMRISEMLTGVRGDIAVKVFGTDLDQLNHAADGIVALLKGIKG 696

Query: 692  LTNLSDNGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVD 751
              ++    ++     K++I R  A R       V N ++ +  GL  G  L  +      
Sbjct: 697  AEDVFTLKNEGVQYLKVEIDRLAAGRLGLPIEDVQNALKTLVEGLPAG--LVVEPGRRTP 754

Query: 752  ILVRYPSEYR-DIGRFDQLRVK-----TAQGLVPLTNFAQIIPEQKQDTIHRVDGRRVIS 805
            +L+R   +Y+  + RF  LR+      T    VPL+  A+I   +    + R + +R + 
Sbjct: 755  VLLRGGPDYKTSVERFADLRLSLPGEGTNVRTVPLSQVAKIERVEGPVKVDRENAQRYVV 814

Query: 806  VMADLKEGYNLALELPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAM 865
            + +++++   +     A  +  ++L LP        GQ E Q+ +A  L     VAL  +
Sbjct: 815  IQSNVRDRDLVGFVEEAQAKVAQQLKLPQGYRIVWGGQFENQQRAAQRLMLVVPVALGLI 874

Query: 866  AIILITQFNSFYQAFLILTAVIFSTV-GVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNN 924
             ++L + F S  QA L+L  + F+ V GVFA LL  Q  +  + + +G IAL GI V N 
Sbjct: 875  FMLLFSTFGSLRQAGLVLAMIPFALVGGVFALLLSGQ--YLSVPASVGFIALLGIAVLNG 932

Query: 925  IVLIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIE 984
            +V++  +NQL  +GL  E+ +     +RLRPVL+T      GL+P++             
Sbjct: 933  VVMLTYFNQLRTQGLPLEQVVREGARRRLRPVLMTASIAAFGLVPLLFA----------- 981

Query: 985  FGAPSTQWWSQLATAVAGGLAFATVLTLVLTPCL 1018
               P ++    LA  V GGL  +T+LTL+L P L
Sbjct: 982  -SGPGSEIQKPLAIVVIGGLLSSTLLTLLLLPIL 1014