Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., cation/multidrug efflux pump from Dechlorosoma suillum PS

 Score =  292 bits (748), Expect = 7e-83
 Identities = 256/1045 (24%), Positives = 462/1045 (44%), Gaps = 44/1045 (4%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            L D  + R      L + +++ G+ +Y  +     P +  P++ V+ +++G S    E  
Sbjct: 3    LSDICIRRPVFATVLSLAVMLIGLVSYQRLSVREYPKIDEPVMTVTTTYRGASAEIVESQ 62

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            I +PLE  +  IEGV  +T+ + +  + + + F +  +   A +DVRD V   + +LP D
Sbjct: 63   ISKPLEDSLAGIEGVDVLTSISRQESSQISVRFRLERNPDSAASDVRDRVSRVRNRLPDD 122

Query: 124  SDEPTVNEVTLAAEQPVLSVVLYGTV--PERTTVLIARQLRDKLESFRQILSVDIAGDRE 181
             DEP + +V   A  PV+ +        P   T +  R ++ +L++      V + G+R+
Sbjct: 123  IDEPVIAKVEADAS-PVIWLAFSSEKHSPLVVTDIANRVVKPRLQTLPGAADVRVFGERK 181

Query: 182  EIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVL 241
              + I +D   + ++ +   ++ + +   N  V AG +++    F+V   +  +  +   
Sbjct: 182  FAMRIWLDKDRLAAHQITAQEVEDALRTQNVEVPAGRIESRQREFAVLAQTDLKEPEQFA 241

Query: 242  ELPIKVEGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKA 301
             + +K      +   D+  V        +  R  GKPA+ L + K+S  N ++    ++A
Sbjct: 242  AIVVKTVNGYPVRIRDLGRVEIGAAAERTNVRFGGKPAVSLGLIKQSTANPLDLSRALRA 301

Query: 302  VLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAIL-GVRTSL 360
             L +  A  + P+ L V+  +D S  +   +  + + I  A+ILV+++I   L  +R +L
Sbjct: 302  ELPKIAA--ELPDGLKVEIAYDSSVFIDRSIESVFSTIGEAVILVLLIIFFFLRNLRATL 359

Query: 361  LVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHR 420
            +  V+IP S +    ++ V G T+N + L AL++A+G++VD AIVV E   R ++EGM  
Sbjct: 360  IPLVTIPVSLIGAFALMFVLGFTINTLTLLALVLAIGLVVDDAIVVLENIYRHIEEGMPP 419

Query: 421  SEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALL 480
             +A    AK + + + A T T  A +AP+ F     G+      LTL   +  S  +AL 
Sbjct: 420  IQASLQGAKEIGFAVVAMTITLAAVYAPVAFMTGRIGKLFIEFALTLAGAVLVSGFVALT 479

Query: 481  FVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGAL 540
              P++ S+  R +   + +    VA+ N        +   Y   L  A+     +L G  
Sbjct: 480  LSPMMCSVLLRHE---EKHGKAFVAIEN----FLNWLNAGYRRILGAALDRRWIVLVG-- 530

Query: 541  LMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEF 600
              + A+A       L +E  P  D              +L   D+    IE++  G  + 
Sbjct: 531  FAAVALACVGMLKLLKSELSPIEDRGVIFGIFNGPEGATLEYTDKYARQIEKIYAGIPDA 590

Query: 601  ESVYTRTGGD-DEIGVVQITPVDWQYRR-SVKAIIEELEQVTDTFPGVEIEYKFPDAGPP 658
             + +  +G      G   +   DW+ R+ S   I ++L       PGV     FP   P 
Sbjct: 591  ANYFVVSGNPIVSQGSAILRLKDWKERQHSSPEIAKQLLPRFRDIPGV---MAFPVTPPS 647

Query: 659  VEHDLE------IEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRR 712
            +           + +S+    +L     +       +P   N+  +         + + R
Sbjct: 648  LGQSARERPINFVIVSSASYQELQATTTKFLAAMAKSPLFLNVDTDLKLNLPQLSVAVNR 707

Query: 713  DDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGR-FDQLRV 771
            D A+        VG T++ +  G ++  +  D   E+ D++V+     R   R    + V
Sbjct: 708  DKAADLGVPVETVGRTLETMLGGRQVTRFKRD--GEQYDVIVQVSDADRANPRDISDIYV 765

Query: 772  KTAQG-LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALREL 830
            +   G ++PL N  Q+        ++    RR +++ A+L  G  L   L A+E    E+
Sbjct: 766  RGKSGEMIPLANLVQVDETISPRELNHFGQRRAVTITANLAPGSTLGEGLAAMEGIAGEV 825

Query: 831  NLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFST 890
              P+       GQ+ E + S   L   F++ALA + ++L  QF SF   F+I+  V  S 
Sbjct: 826  Q-PAGYAVDYNGQSREFKTSTASLALTFILALAFIYLVLAAQFESFRDPFIIMLTVPLSM 884

Query: 891  VGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGV 950
             G    LL+       + S IG++ L G++  + I++++  NQL ++G +  EA++    
Sbjct: 885  AGALLALLLSGGTLN-VYSQIGLVTLVGLITKHGILIVEFANQLQEQGRNVREAVIEAAE 943

Query: 951  QRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVL 1010
             RLRP+L+TT   +LG +P+ L             GA S    SQ+   + GGL   T  
Sbjct: 944  LRLRPILMTTGAMVLGAIPLALARGA---------GAESR---SQIGWVIVGGLLLGTFF 991

Query: 1011 TLVLTPCLLMLGRRRKGVSEDEAPQ 1035
            TL + P +  L  RRKG+    A Q
Sbjct: 992  TLFVVPTVYTLMARRKGMDRVAAEQ 1016