Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1025 a.a., multidrug transporter subunit MdtC from Klebsiella michiganensis M5al

 Score =  271 bits (694), Expect = 1e-76
 Identities = 241/1027 (23%), Positives = 450/1027 (43%), Gaps = 57/1027 (5%)

Query: 16   LTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSI 75
            + L + I + G+  +  +P    P V  P+I +S S  G SP      +  PLE+ +  I
Sbjct: 15   ILLSLAITLCGILGFRLLPVAPLPQVDFPVIMISASLPGASPETMASSVATPLERSLGRI 74

Query: 76   EGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLA 135
             GV EMT+++S G   ++LEFN   D+  A  DV+ A++ A+  LP+             
Sbjct: 75   AGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANP 134

Query: 136  AEQPVLSVVLYGTVPERTTV--LIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLM 193
            ++ P++ + L      +  +    + QL   L     +  VD+ G     V + ++P  +
Sbjct: 135  SDAPIMILTLTSDTWSQGELYDFASTQLAQTLAQIDGVGDVDVGGSSLPAVRVDLNPQAL 194

Query: 194  ESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVI 253
             + G+    +   I+  N     G ++    R+ V      ++  +   L +       +
Sbjct: 195  FNQGVSLDAVRTAISNANVRRPQGALEDATHRWQVATNDELKTAAEYQPLIVHYNNGAAV 254

Query: 254  TFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWP 313
              GDVA V  S +D  +    + KPAI+L I+K    NIIETV+ ++A L E Q     P
Sbjct: 255  RLGDVANVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIETVDSIRARLPELQRTI--P 312

Query: 314  NNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAIL-GVRTSLLVGVSIPGSFLT 372
             ++ ++   D S  ++  L +++  ++ ++ LV++V+   L   R +L+  V++P S + 
Sbjct: 313  ASVDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATLIPAVAVPVSLIG 372

Query: 373  GLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMA 432
                + + G ++N + L AL +A G +VD AIVV E   R ++ GM   +A    ++ + 
Sbjct: 373  TFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKPLQAALQGSREVG 432

Query: 433  WPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRP 492
            + + + + + +A F PLL    + G  ++   +TL   +  SL ++L   P++     + 
Sbjct: 433  FTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLAVSLTLTPMMCGWLLKS 492

Query: 493  QKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFAYGK 552
             K  Q  + R      G       I   Y  +L   ++H    L G +L+       +  
Sbjct: 493  GKPHQPTRKR------GFGRLLVAIQGGYGKSLKWVLKH--SRLTGLVLLGTIALSVWLY 544

Query: 553  AGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTGG--- 609
              +   FFPE D       +++   +S       + D  +++      ++V   TGG   
Sbjct: 545  ISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLEDFMKIIREDPAVDNVTGFTGGSRV 604

Query: 610  DDEIGVVQITPVDWQYRRSVKAIIEELEQVTDTFPGV--------EIEYKFPDAGPPVEH 661
            +  +  + + P D +   + + II+ L +     PG         +I      A    ++
Sbjct: 605  NSGMMFITLKPRD-ERHETAQQIIDRLRKKLAKEPGANLFLMAVQDIRVGGRQANASYQY 663

Query: 662  DLEIEISARVADDLDKAAQ---QVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRF 718
             L       ++DDL    +   ++R    A P L +++ +    G +  +   RD  SR 
Sbjct: 664  TL-------LSDDLAALREWEPKIRKTLAALPELADVNSDSQNNGAEMDLIYDRDTMSRL 716

Query: 719  AADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQGL- 777
                    N +       +I       +  +V + V  P   +D+   D++ V  ++   
Sbjct: 717  GISVQDANNLLNNAFGQRQISTIYQPLNQYKVVMQVD-PVYTQDVSALDKMFVINSEDKP 775

Query: 778  VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSVE 837
            +PL  FA+  P     +++        ++  +L  G +L+    AI +A+ ++ +PSSV 
Sbjct: 776  IPLAYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSEASDAINRAMTQIGVPSSVR 835

Query: 838  FRIRGQN---EEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVF 894
                G     +E  +S V L    + A+A + I+L   + S+     IL+ +  + VG  
Sbjct: 836  GSFAGTAQVFQETMNSQVIL---ILAAIATVYIVLGILYESYVHPLTILSTIPSAGVGAL 892

Query: 895  AGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRG-LSREEAILRTGVQRL 953
              L +F  PF +I + IG++ L GIV  N I+++D   +  + G L  EEAI +  + R 
Sbjct: 893  LALELFDAPFSLI-ALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLPPEEAIFQACLLRF 951

Query: 954  RPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLV 1013
            RP+++TT+  + G LP+VL             G   ++    L   + GGL  + +LTL 
Sbjct: 952  RPIMMTTLAALFGALPLVLS------------GGNGSELRQPLGITIVGGLVMSQLLTLY 999

Query: 1014 LTPCLLM 1020
             TP + +
Sbjct: 1000 TTPVVYL 1006