Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1040 a.a., multidrug transporter subunit MdtB from Klebsiella michiganensis M5al

 Score =  284 bits (726), Expect = 3e-80
 Identities = 248/1026 (24%), Positives = 463/1026 (45%), Gaps = 52/1026 (5%)

Query: 18   LLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEG 77
            L+V I++AG+  Y  +P  + P+V  P I V   + G SP      +  PLE++   + G
Sbjct: 26   LMVAIMLAGIIGYRFLPVSALPEVDYPTIQVVTLYPGASPDVMTSSVTAPLERQFGQMSG 85

Query: 78   VKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAAE 137
            +K+M++ +S G + V L+F + + L  A  +V+ A++ A   LP+D   P V      A+
Sbjct: 86   LKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPAD 145

Query: 138  QPVLSVVLYGTVPERTTV--LIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLMES 195
             P++++ +  +    T V  ++  ++  K+     +  V +AG +   V + ++   + +
Sbjct: 146  PPIMTLAVTSSAVPMTQVEDMVETRVAQKISQVSGVGLVTLAGGQRPAVRVKLNAQAIAA 205

Query: 196  YGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVITF 255
             GL    +   I   N   A G +D      ++      +S +D   L I  +    I  
Sbjct: 206  LGLTSETVRTAITSANVNSAKGSLDGPSRAVTLSANDQMQSAEDYRRLIIAWQNGAPIRL 265

Query: 256  GDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWPNN 315
            GDVATV +   +    A  + + AIV++++++ G NII T + ++ +L   Q  +  P +
Sbjct: 266  GDVATVEQGAENSWLGAWANNQRAIVMNVQRQPGANIISTADSIRQML--PQLTESLPKS 323

Query: 316  LLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAIL-GVRTSLLVGVSIPGSFLTGL 374
            + V+ + D + +++  ++D Q  ++ AI LVV++I   L  V  +++ G+++P S +   
Sbjct: 324  VKVQVLSDRTTNIRASVSDTQFELMLAIALVVMIIYVFLRNVPATIIPGIAVPLSLVGTF 383

Query: 375  LVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAWP 434
             V+     ++N + L AL +A G +VD AIVV E   R +++G     A    A  + + 
Sbjct: 384  AVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFT 443

Query: 435  ITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQK 494
            I + T + +A   PLLF  D+ G   +   +TL   +  S V++L   P++ +     + 
Sbjct: 444  IISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSHES 503

Query: 495  VTQANQARMVALHNGDFSQAT-----GITKAYYSTLAIAIRHPIKILCGALLMSAAIAFA 549
            + + N+          FS+A+      +   Y   L+  + HP   L  AL   A     
Sbjct: 504  LRKQNR----------FSRASERFFERVIAVYGRWLSRVLNHPWLTLSVALSTLALSIML 553

Query: 550  YGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTGG 609
            +     G  FFP  D       +++    S          +   +L     ES+ +  G 
Sbjct: 554  WVFIPKG--FFPIQDNGIIQGTLQAPQSASFANMAERQQQVSAAILKDPAVESLTSFVGV 611

Query: 610  DDEIGV-------VQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKFPDAGPPVEHD 662
            D            + + P+D +  R V+ +I  L+      PGVE+ Y  P     ++  
Sbjct: 612  DGTNPALNSARLQINLKPLDERDDR-VQTVIGRLQNAVSGIPGVEL-YLQPTQDLTIDTT 669

Query: 663  L-----EIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASR 717
            +     +  + A   D L     Q+    +A P L+++S +    G+   I++ RD ASR
Sbjct: 670  VSRTQYQFTLQANSLDALSNWVPQLLARLQALPQLSDVSSDWQDKGLAAYINVDRDSASR 729

Query: 718  FAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQ-G 776
                   V N + +   G ++   +   +++   +L         +   D +R+ ++  G
Sbjct: 730  LGISMADVDNAL-YNAFGQRLISTIYTQANQYRVVLEHDTQATPGLAALDNIRLTSSDGG 788

Query: 777  LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSV 836
            +VPLT  A++       +I+ +D   V ++  ++ + Y+L   + AI  A + L+ PS +
Sbjct: 789  IVPLTAIAKVEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVEAILSAEQALDFPSDI 848

Query: 837  EFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAG 896
              + +G +   + +        + A+ AM I+L   + SF     IL+ +  + VG    
Sbjct: 849  RTQFQGSSLAFQSALGSTVWLVVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLA 908

Query: 897  LLIFQKPFGIIMSGIGVIALAGIVVNNNIVLID-TYNQLLKRGLSREEAILRTGVQRLRP 955
            L +      +I + IG+I L GIV  N I++ID       ++G+   EAI +  + R RP
Sbjct: 909  LWLAGSELDVI-AIIGIILLIGIVKKNAIMMIDFALAAEREQGMPPREAIYQACLLRFRP 967

Query: 956  VLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLT 1015
            +L+TT+  + G LP++L   +       E   P       L   + GGL  + VLTL  T
Sbjct: 968  ILMTTLAALFGALPLMLSTGVG-----AELRRP-------LGIGMVGGLMLSQVLTLFTT 1015

Query: 1016 PCLLML 1021
            P + +L
Sbjct: 1016 PVIYLL 1021