Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1027 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  305 bits (781), Expect = 1e-86
 Identities = 270/1040 (25%), Positives = 475/1040 (45%), Gaps = 81/1040 (7%)

Query: 19   LVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEGV 78
            ++ +LV G  ++  + +   P+ TI    V  ++ G SP   E  +  PLE  ++ ++ V
Sbjct: 18   VLLLLVGGGVSFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAV 77

Query: 79   KEMTATASEGHASVVLEFNVGVD---LAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLA 135
            K +T+  S G + + +E     D   L +   +VR  V+    +LP  +  P V +    
Sbjct: 78   KHVTSINSAGLSQIQIEIKETYDKTSLPQVWDEVRRKVNDTAGQLPPGTSTPKVYD-DFG 136

Query: 136  AEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLMES 195
                +L  +       R     A  LR +L     +  V +AG   E V I +    + +
Sbjct: 137  DVYGILFNLSGPDYSNRELSNYADYLRRELVLVPGVKKVSVAGSVTEQVVIEISQQKLSA 196

Query: 196  YGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGK-QVIT 254
             GLDQS IY LI   N V  AG +  G  R  +     F S++D+  L +   G  ++I 
Sbjct: 197  LGLDQSYIYGLINNQNVVSNAGSLVVGDNRIRIHPTGEFSSVQDLARLIVSPPGSTELIY 256

Query: 255  FGDVATVRKSFRD-PESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWP 313
             GD+A + K + + P+      G+ A+ L I   SG N++E  + V   L E +++   P
Sbjct: 257  LGDIAHIEKDYDETPDVLYHNRGEAALSLGISFSSGVNVVEVGKSVSERLAELESQR--P 314

Query: 314  NNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLLVGVSIPGSFLTG 373
              + + T++++S  V   +N    N+L +I +V+ V++  +G+R+ LL+G+ +  + L  
Sbjct: 315  IGMNLDTVYNQSLAVDDTVNGFLINLLESIAIVIAVLLLFMGLRSGLLMGLILLLTILGT 374

Query: 374  LLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAW 433
             +V+ V G+ + ++ L ALI+A+GMLVD AIVVTE     ++ G  R EA +    +  W
Sbjct: 375  FIVMKVLGIELQLISLGALIIALGMLVDNAIVVTEGILIGLRRGKTRLEAAKQIVTQTQW 434

Query: 434  PITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQ 493
            P+  +T   + AFAP+    +  GEF + L   LM +L  S + A+   P    L  +  
Sbjct: 435  PLLGATVIAIIAFAPIGLSQNAAGEFCRSLFQVLMISLFISWITAITLTPFFCHLLFKDA 494

Query: 494  KVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIK--ILCGALLMSAAIAFAYG 551
                  Q      + G F         Y ++L  A+R  I   +L GA+L++A I F + 
Sbjct: 495  PADDEEQDP----YKGWF------FSLYRASLTFALRFRIASILLVGAMLVTAVIGFGHI 544

Query: 552  KAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVML-----GHDEFESVYTR 606
            K      FFP  + P F V +       +   +R  +DIEQ++L      H   + + T 
Sbjct: 545  K----NVFFPASNTPIFFVDIWMPEGTDIKGTERFTADIEQLLLKQAEEQHSGLKHLTTV 600

Query: 607  TGGDDEIGVVQITP-----------VDWQYRRSVKAIIEELE-QVTDTFPGVEIEYKFPD 654
             G   +  V+   P           ++ +   S+K  + ELE Q+   FP  +  +K  +
Sbjct: 601  IGQGAQRFVLPYQPEKGYPAFAQLIIEMEDLASLKVYMSELERQLNQRFPQAQYRFKNME 660

Query: 655  AGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDD 714
             GP     +E        + L     Q      A P++  +         DW+  +    
Sbjct: 661  NGPSPAAKIEARFYGDDPEVLRALGAQAEAIFHAEPSMDGVRH-------DWRNQVPLIR 713

Query: 715  ASRFAADATLVGNTVQFVTN-------GLKIGDYLPDDSDEEVDILVRYPSEYR-DIGRF 766
                 A A   G + Q + N       G +IG Y   ++   + I+ R P+E R      
Sbjct: 714  PQLQNAQARETGISKQDLDNALLINFSGKQIGLY--RETSHLLPIVARAPAEERLQADSL 771

Query: 767  DQLRVKTAQ--GLVPLTN-FAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALE--LP 821
             +L++ +++    VP T   +Q   + +   + R D  R+++V+AD K G +   +  L 
Sbjct: 772  WKLQIWSSEHSTFVPATQVVSQFETQWENPLVKRRDRMRMLAVLADPKLGSDETADSVLR 831

Query: 822  AIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFL 881
             ++  +  +++P+       G+ E    +   +  +  +   AM +I +  FNS  Q  +
Sbjct: 832  KVKDKVEAISIPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITVFLFNSVRQPLV 891

Query: 882  ILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSR 941
            I   V  + +GV AGLLIF  PF   M+ +G+++L+G+V+ N IVL+D  N  L  G   
Sbjct: 892  IWFTVPLALIGVSAGLLIFDAPFS-FMALLGLLSLSGMVIKNGIVLVDQINLELDEGKPA 950

Query: 942  EEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVA 1001
              A++ + V R+RPV++  +TT+LG++P++ +                  ++  +A  + 
Sbjct: 951  YIALVDSSVSRVRPVMMAAITTMLGMIPLIPD-----------------AFFGSMAITII 993

Query: 1002 GGLAFATVLTLVLTPCLLML 1021
             GL FA++LTL++ P +  L
Sbjct: 994  FGLGFASLLTLIVLPVMYSL 1013