Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1018 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  286 bits (732), Expect = 5e-81
 Identities = 267/1054 (25%), Positives = 503/1054 (47%), Gaps = 100/1054 (9%)

Query: 8    ALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRP 67
            A+ R  T       IL+ G+A+   +P E  P + IP I V V ++G +P++ ER I + 
Sbjct: 7    AIKRPVTTSMFFFAILLFGLASSRLLPLEMFPGIDIPQIVVQVPYKGSTPAEVERDITKV 66

Query: 68   LEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEP 127
            LE+ + ++ G+ E+ + +S+  + + +    G ++A    + R+ +D  +  LP D +  
Sbjct: 67   LEESLATMGGIDELESESSQEGSEIEINMKWGENVATKSLEAREKIDAVRHLLPKDVERV 126

Query: 128  TVNEVTLAAEQPVLSVVLYGTVPERTTV-LIARQLRDKLESFRQILSVDIAGDREEIVEI 186
             + + +  A+ PVL++ +           L+ +QL+  LE    +  V++ G  ++ +E+
Sbjct: 127  FIRQFS-TADMPVLTIRISSDRELSGAFDLLDKQLKRPLERVEGVSKVNLYGVEQKQIEV 185

Query: 187  IVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIK 246
             ++   + + G   +++   +   N V++AG +      + V     F +L+D+  L + 
Sbjct: 186  RINANRLAASGYSATELQTRLGRENFVLSAGTLRESNLVYQVSPKGEFRNLEDIKAL-VL 244

Query: 247  VEGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEA 306
            + G   +T GDVA V+ +  +      LD   A+ LD+ K SG N++E  + V  V+ E 
Sbjct: 245  LPG---LTLGDVADVQFALPERVEGRHLDKHYAVGLDVFKESGANLVEVSDRVLKVI-EL 300

Query: 307  QARDDWPNNLLVKTIWDESEDVKLMLNDLQ-NNILSAIILVVVVIIAILGVRTSLLVGVS 365
              +D     + +  + D++  VK  L+DL  + ++ A++  +V+ + +   + +L+V  S
Sbjct: 301  AKQDQQFQGIRLFIMEDQASGVKSSLSDLLLSGLIGALLSFIVLYLFLRNFKMTLIVVSS 360

Query: 366  IPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRS---- 421
            +P S    L  + + G ++NI+ +  L++AVGML+D A+VVTE   +  Q    +S    
Sbjct: 361  VPISIGMTLAAMYLLGYSLNILSMMGLLLAVGMLIDNAVVVTESVLQEKQGKNTKSVQDN 420

Query: 422  -EAYRDAAKRMAWPITASTATTLAAFAPLLFWPDV-TGEFMKYLPLTLMATLTASLVMAL 479
              A      +++  + A T TT   F P +F   V    F++++ + +  +L ASL++A 
Sbjct: 421  ENAVMTGVDKVSLAVLAGTMTTAIVFLPNIFGVKVELTIFLEHVAIAICISLAASLLVAK 480

Query: 480  LFVPVLGSLFG---RPQKVTQANQARMVALHNGDFSQATGITKAYYS-TLAIAIRHPIK- 534
              +P++ + F     P+K                   A G  + +Y+ +L   +  P + 
Sbjct: 481  TLIPLMLTKFHFDITPEK-------------------APGKLQNFYNRSLNWVLLRPWRS 521

Query: 535  -ILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQV 593
             ++  A+L+S A+  +  K     E     +  + + +V   G  +LN  + ++S +E+ 
Sbjct: 522  GLISVAILISTALPLSMVKQ--DQEDSQSKERIYVNYQVE--GRHNLNVTEAMVSQMEEY 577

Query: 594  MLGHDE---FESVYTRTGGDDEIGVVQITPVDWQYRRSVKAIIEEL-EQVTDTFPGVEIE 649
            +  + E    +SVY+    DD   V+ +       ++ +   ++EL +++   FP     
Sbjct: 578  LYNNKEEFHIDSVYSYYAPDDASSVILL-------KKDLPMPLDELKKKIRSGFP----- 625

Query: 650  YKFPDAGPPV-----EHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSD------- 697
             KF  A P          + + ++ R   +L   ++QV       P L+N+         
Sbjct: 626  -KFSIAKPQFGWGNDNSGVRVTLTGRSTSELIHLSEQVL------PLLSNIKGLVDVRSE 678

Query: 698  -NGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRY 756
             NG++  +   I I R  A+R       V +++     G  +  +   D + E+ I + Y
Sbjct: 679  VNGAQQEV--VIRINRQMAARLDLKLNEVASSISMALRGSPLRSF-RHDPNGELRIEMAY 735

Query: 757  PSEY-RDIGRFDQLR-VKTAQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGY 814
              E+ + + +  QL  V+  Q L  L N A I  + + DTI   + +  +S+ A+L    
Sbjct: 736  EKEWQKSLEKLKQLPIVRIDQRLYTLDNLASIEIQPRFDTIKHYNRQTSLSIGANLD--- 792

Query: 815  NLALE--LPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQ 872
            NL  E     I+Q +  +  P+   + +RG  E Q+     +    ++A+A + I++   
Sbjct: 793  NLTTEEAQTKIKQVMENVRFPNGYNYSLRGGFERQDEDQSVMAINMLLAIAMIYIVMAAL 852

Query: 873  FNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYN 932
            F S      I+T+++FS  GVF  LL+   P   +M+ IG++ L GIVVNN IVL+D  N
Sbjct: 853  FESLLLPTAIITSILFSITGVFWALLLTGTPMS-VMAMIGILILMGIVVNNGIVLVDQIN 911

Query: 933  QLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQW 992
            Q+        + I    + RLRPVL+T  TT+LGL+P+ +       + +I  G P    
Sbjct: 912  QMTPELDKLPDTIREVCITRLRPVLMTVGTTVLGLVPLAMG------DTQIGGGGPP--- 962

Query: 993  WSQLATAVAGGLAFATVLTLVLTP-CLLMLGRRR 1025
            +S +A A+ GGL+F+TV +L L P C  +L R R
Sbjct: 963  YSPMAIAIIGGLSFSTVTSLYLVPLCYQLLYRMR 996