Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  322 bits (825), Expect = 9e-92
 Identities = 258/1053 (24%), Positives = 482/1053 (45%), Gaps = 53/1053 (5%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            L D ++ R      + + ++  G+  +  +P    P++  PI+ +  +++G S +  E  
Sbjct: 3    LTDLSVKRPVFASVISLLLVAFGLVAFDKLPLREYPNIDPPIVSIETNYRGASAAVVESR 62

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            I + +E  +  +EG++ +++++S+G + V LEF++  ++  A  DVRD +      LP +
Sbjct: 63   ITQLIEDRISGVEGIRHVSSSSSDGRSQVTLEFDISRNIEDAANDVRDRISGLLDNLPEE 122

Query: 124  SDEPTVNEVTLAAEQPV-LSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREE 182
            +D P V +     E  + L++V         T    R L D+L     +  + I G +  
Sbjct: 123  ADPPEVQKANGGDEVIMWLNLVSDQMTTLELTDYTRRYLSDRLSVVDGVSMIRIGGGKVY 182

Query: 183  IVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLE 242
             + + +D   + S  L  +D+   +   N  + AG +++    F+V++   + + +D   
Sbjct: 183  AMRVWLDRQALASRSLTVADVEAALRAENVELPAGSLESKERHFTVRLERSYRTAEDFAN 242

Query: 243  LPIKV-EGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKA 301
            L I   E   ++  GDVA V     +     R + +  I L + K+S  N +E    V A
Sbjct: 243  LVISQGEDGYLVKLGDVAKVEIGSEEERIMFRGNKEAMIGLGVSKQSTANTLEVARAVNA 302

Query: 302  VLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTSL 360
            ++ +       P  + +K  +D S  ++  + ++   + +A++LV++VI   LG VR  L
Sbjct: 303  LVDKINPT--LPAGMSIKRSYDSSVFIEASIKEVYQTLFTAMVLVIIVIYLFLGSVRAML 360

Query: 361  LVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHR 420
            +  +++P S L   +VL   G T+N++ L A+I+A+GM+VD AIV+ E   RR++EG   
Sbjct: 361  IPAITVPVSLLGTFIVLYALGYTINLLTLLAMILAIGMVVDDAIVMLENIHRRIEEGDSP 420

Query: 421  SEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALL 480
             +A    A+ +A+ + A+T   +A F P+ F     G+  K   + + A +  S ++AL 
Sbjct: 421  LKAAFLGAREVAFAVIATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSIVALT 480

Query: 481  FVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGAL 540
              P++ S   +P     A+Q   +       S  TGI++ Y ++L  A+  P+       
Sbjct: 481  LSPMMCSKLLKP-----ASQDSWLVRKVD--SIMTGISRGYQNSLEKAMARPV------- 526

Query: 541  LMSAAIAFAYGKAGLGA-----EFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIE---Q 592
            LMS  +  A G + L A     EF P+ D     + V      S    +  M+++E    
Sbjct: 527  LMSILVLIALGSSVLLAQKVPQEFAPQEDRGSLFLMVNGPQGASYEYIESYMNEVENRLM 586

Query: 593  VMLGHDEFESVYTRT------GGDDEIGVVQITPVDWQYRRSVKAIIEELEQVTDTFPGV 646
             ++   + + +  R         D   G+  I   DW  RR +K +I ++ +      GV
Sbjct: 587  PLVDSGDIKRLLIRAPRGFGRAADFSNGMAIIVLEDWGQRRPMKEVIGDINKRLADLAGV 646

Query: 647  EIEYKFPDA-GPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGID 705
            +       A G  V   ++  I     ++L +    +   A  NP L  L  +  +    
Sbjct: 647  QAFPVMRQAFGRGVGKPVQFVIGGPSYEELARWRDIMMEKAAENPKLLGLDHDYKETKPQ 706

Query: 706  WKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGR 765
             ++ I RD A+      + +G T++ +     +  ++ D   EE D++V      ++   
Sbjct: 707  LRVVIDRDRAASLGVSISNIGRTLESMLGSRLVTTFMRD--GEEYDVIVEGERSNQNTAA 764

Query: 766  FDQ---LRVKTAQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPA 822
              Q   +R +  + L+PL+N   +       +++R +  R I++ A L +GY+L   L  
Sbjct: 765  DLQNIYVRSERTKELIPLSNLVTVEEFADASSLNRYNRMRAITIEASLADGYSLGEALDY 824

Query: 823  IEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLI 882
            + Q  R   LP+      +GQ+ + + S   +   F++AL  + ++L  QF S+    +I
Sbjct: 825  LNQVARAY-LPAEAVISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVI 883

Query: 883  LTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSRE 942
            +  V  +TVG   GL    +    I S IG+I L G+   N I++++  NQL  +G+  +
Sbjct: 884  MLTVPLATVGALIGLWFTGQSLN-IYSQIGIIMLVGLAAKNGILIVEFANQLRDKGVDFD 942

Query: 943  EAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAG 1002
             AI++   QRLRP+L+T +TT  G +P+VL        + +            +   V  
Sbjct: 943  RAIIQASCQRLRPILMTGITTAAGAVPLVLAAGAGAETRFV------------IGVVVLS 990

Query: 1003 GLAFATVLTLVLTPCLLMLGRRRKGVSEDEAPQ 1035
            G+  AT+ T+ + P    L  R  G  E  A Q
Sbjct: 991  GIMLATLFTIFVIPTAYGLFARNSGSPEAIAQQ 1023