Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 24/229 (10%)

Query: 45  QTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGAEI-------AGRIAEVK 97
           +T++ + V L  V    F+      + + Y  T   R A+I A++       +G + E+K
Sbjct: 2   RTSVRVAVTLCMVAVAIFAGFH---LWQYYMLTPWTRDARIRADVVVIAPDVSGWVRELK 58

Query: 98  IAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQ-------EFNAASALKNKGLQGE 150
               Q V    ++  ID+   +A LE+A+A ++ RQQ       E +  +AL  + +  E
Sbjct: 59  AVDNQQVKAGDVLLNIDRERFEAALEKARAVVQTRQQQLGLREHEASRRAALGPQAISAE 118

Query: 151 V---AFTNAAAA---LTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPV 204
           +   A  NA  A   L +AQ+     +  L  +QV AP +G +  L + +G++V  G PV
Sbjct: 119 LRENAQINAGIARGELREAQAEAKVAELNLARSQVLAPRNGHITNLRLAEGNYVNAGQPV 178

Query: 205 ASIIDLHKLVIEADVSERHIQHVQLEQAARIRFID-GTQTQGKVRYISR 252
            ++ID     ++A   E  +  +++    +I  +  G   +G V  ISR
Sbjct: 179 MALIDDSTFYVQAYFEETKLPRIRVGDPVKIWLMSAGHALEGHVESISR 227