Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 13/180 (7%)

Query: 84  KIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAAS--A 141
           +I  +++G I +V++   Q V + Q++  ID+      L +AKA +  RQ+    A   A
Sbjct: 49  QIAPDVSGLIQQVEVRDNQPVKRGQVLFSIDQDRFKLALRQAKATVADRQETLAQAQREA 108

Query: 142 LKNKGL----------QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLP 191
            +N+GL          + +     A  AL++AQ S+ + Q  LD + +R+P DG V    
Sbjct: 109 KRNRGLGNLVPGEQLEESQSRVARAEVALSEAQVSVDSAQLNLDRSVIRSPVDGYVNDRA 168

Query: 192 IEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFI-DGTQTQGKVRYI 250
               +FV  G P+ S++D +   I+    E  +  + + Q   IR I D  + +G V  I
Sbjct: 169 PRTQEFVTAGRPMLSVVDSNSFHIDGYFEETKLDGIHVGQGVDIRVIGDRARLRGHVESI 228