Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 87/373 (23%), Positives = 156/373 (41%), Gaps = 59/373 (15%)

Query: 36  LGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVI---------ELYGRTAPDRQA--K 84
           L  ++AEE   + + Q P + V  +      TD+VI         E+Y     D  A   
Sbjct: 20  LVSASAEEAVKSPQKQAPPSIVVTEATERAITDRVIATGSIEAVDEIYVSPLVDGLAIRS 79

Query: 85  IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKA---QLKVRQQEFNA--- 138
           +  ++  R+ E     G +   N+   L+ K  L+A L +A+A   QL  +  E  A   
Sbjct: 80  LNVDVGDRVEE----GGTLAVLNEDALLLQKSQLEANLAKAEASLAQLHAQLAEVTANSE 135

Query: 139 ----------------------ASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDN 176
                                 A  LK     G     +A  +++ A + +  VQ  +D+
Sbjct: 136 EATRVAERAVQLSKNGTVSTAEADRLKALAAAGRARVRSAEQSVSVATADIKVVQAQIDD 195

Query: 177 -------TQVRAPFDGVVETLPIEKGDFV-GIGDPVASIIDLHKLVIEADVSERHIQHVQ 228
                  T V+AP  GV+     + G    G G+P+ +II   ++ + ADV+E  +  + 
Sbjct: 196 VDLRLARTAVKAPVSGVISRKNAKVGAIASGSGEPLFAIIRDGEIEMWADVAESDVIKLA 255

Query: 229 LEQAARIRFIDGTQT-QGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLM 287
           + Q A ++    T T +GK+R I+    P T    + + + +  +A  AG+ A   + + 
Sbjct: 256 VGQTATVKLAGSTTTIEGKIRLIAPTVDPQTRLGTVRISLTDASKA-RAGMYASAVI-VA 313

Query: 288 SQAAIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVW---LTGLGEQVDII 344
            Q    + P      E+G   V+ ++   V+ VP++     QDG +   L+G+      +
Sbjct: 314 EQKETVVLPQTAVTSEDGKSIVRKVEDGVVRLVPVE--TGIQDGQFIEILSGIRPGEQAV 371

Query: 345 TRGQGFVRDGDKV 357
            +   +VRDGD++
Sbjct: 372 AKAGAYVRDGDRI 384