Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 66/312 (21%), Positives = 138/312 (44%), Gaps = 18/312 (5%)

Query: 52  VPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIA 111
           + LAK    T         + + G   P R++ + + ++  I E+ +  G +V    ++ 
Sbjct: 39  IELAKADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLV 98

Query: 112 LIDKGDLDAQLERAKAQLKVRQQEFNAASALKNK----GLQGEVAFTNAAAALTDA---- 163
             ++G L++ +   KA+      +   A A+  +    G +G  +     AAL D     
Sbjct: 99  RFERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLR 158

Query: 164 ------QSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEA 217
                 Q+ +S  +R L + +VRA F GV+    +E+G  V +   + +I++L++L ++A
Sbjct: 159 AQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDA 218

Query: 218 DVSERHIQHVQLEQAAR--IRFIDGTQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIP 275
            V    I  ++L+Q+    +    G    G+V  IS  +   +    + + VDN +  + 
Sbjct: 219 GVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLR 278

Query: 276 AGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVK--AEQDGVW 333
            G+    +L +  Q  +   PA     +     V  ++   ++  P+ L +  +++D V 
Sbjct: 279 GGMFTIGDLRVDDQKDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQ 338

Query: 334 LTGLGEQVDIIT 345
           ++G+ E   I+T
Sbjct: 339 VSGVSEGDVIVT 350