Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 85/352 (24%), Positives = 143/352 (40%), Gaps = 41/352 (11%)

Query: 25  SFIILLALWLGLGDS-------NAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRT 77
           S II +AL LG  DS         +EP+ A  + V    V ++  + T+T          
Sbjct: 9   SAIIAMALILGGCDSATPKPDRGGKEPRKAQPVMV--VPVRFEEGARTRT-----FAATI 61

Query: 78  APDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFN 137
            P  ++ +G  I+G++A   +  G +V   Q +  +D  DL  Q E+A+A++K  Q    
Sbjct: 62  RPSIESDLGFRISGKVARRLVRTGDLVRSGQALLTLDTNDLRLQREQAEAEVKAAQSNLI 121

Query: 138 AASA-------LKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLD-------NTQVRAPF 183
            A A       L++KG     A   A A   +A+S L   QR LD          + A  
Sbjct: 122 QAEADEGRAVELQSKGWMANAALQKAHATAEEARSRLIRAQRALDLAGHALGYATLEADA 181

Query: 184 DGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAA-RIRFIDGTQ 242
           DGV+   PIE G  +  G     +  L +L     + E +++ V    A+  +  + G  
Sbjct: 182 DGVITATPIEPGQVISAGQAAVRLARLSELEAVVALPESYVERVGRASASLSLWSLPGKT 241

Query: 243 TQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITP------ 296
              ++R +S  +  AT TFA    +      +  G+SA + L    +      P      
Sbjct: 242 YDARLRELSFAADLATRTFAARFVIPGADDKVRIGMSATLTLREQDERRFARLPLTAVYN 301

Query: 297 -----AMLALDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVWLTGLG-EQVD 342
                A+  + + G L  + +  E  +   + +     DG  +  LG E++D
Sbjct: 302 HGRGAAVFVVGDGGELHERPVTIERYEDRNVLVTSGVSDGETVVALGVEKLD 353