Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., efflux RND transporter periplasmic adaptor subunit from Parabacteroides merdae CL09T00C40

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 10/298 (3%)

Query: 67  TDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126
           TDK I + G T PD +  +  E +G+I  +   +G  V    ++A I+   L A+L++ +
Sbjct: 65  TDKTI-VTGSTIPDEEVDLSFESSGKIVAIYFTEGTHVKAGDLLAKINDKPLQAELKKLE 123

Query: 127 AQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGV 186
           AQ+ + +        L  K    + A+   A       + +  V+  +  T++RAPFDG+
Sbjct: 124 AQVPLAKDRVYRQHTLLEKDAVSQEAYEQVATEYEKLMADIELVKANIAQTELRAPFDGI 183

Query: 187 VETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQT--- 243
           +    + +G +      +  +  +  L IE  V ER+     ++    I F   T     
Sbjct: 184 IGLRNVSEGAYASPSTVITKLTKISPLKIEFSVPERY--SADIKDGTPIVFRMNTSVGMM 241

Query: 244 ---QGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLA 300
              +  V  +      AT +  +     N  ++I  G    VE++          P+   
Sbjct: 242 QDYKATVYAVESKIDEATRSLKVRATYPNRDESIVPGRYTSVEITRRDIKDALAIPSEAL 301

Query: 301 LDEEGNLGVKTLQGEHVKFVPIQL-VKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
           + E G   V   +    +   I L ++ E     L GL     +IT G   +R G KV
Sbjct: 302 IPEMGKNIVYLYKNGVAEPAEIILGLRTESQVQVLKGLSVGDTVITSGVMQLRTGMKV 359